Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H3AP68431 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H3AP68431 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H3AP68431 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H3AP68431 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H3AP68431 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H3AP68431 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H3AP68431 AC018442.1-201ENST00000421439 2061 ntBASIC13.32□□□□□ -0.28
HIST1H3AP68431 REXO1L5P-201ENST00000622260 2098 ntBASIC13.32□□□□□ -0.28
HIST1H3AP68431 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H3AP68431 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
HIST1H3AP68431 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H3AP68431 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
HIST1H3AP68431 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
HIST1H3AP68431 SF1-209ENST00000433274 2317 ntTSL 2 BASIC13.32□□□□□ -0.28
HIST1H3AP68431 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.32□□□□□ -0.28
HIST1H3AP68431 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H3AP68431 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
HIST1H3AP68431 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H3AP68431 NSL1-201ENST00000366976 722 ntTSL 2 BASIC13.32□□□□□ -0.28
HIST1H3AP68431 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H3AP68431 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H3AP68431 MIR661-201ENST00000384842 89 ntBASIC13.32□□□□□ -0.28
HIST1H3AP68431 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.32□□□□□ -0.28
HIST1H3AP68431 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.32□□□□□ -0.28
HIST1H3AP68431 AC098850.1-201ENST00000419919 790 ntBASIC13.32□□□□□ -0.28
HIST1H3AP68431 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
HIST1H3AP68431 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.32□□□□□ -0.28
HIST1H3AP68431 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
HIST1H3AP68431 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H3AP68431 AC123567.1-201ENST00000548294 1261 ntBASIC13.32□□□□□ -0.28
HIST1H3AP68431 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
HIST1H3AP68431 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.32□□□□□ -0.28
HIST1H3AP68431 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
HIST1H3AP68431 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.32□□□□□ -0.28
HIST1H3AP68431 AL096865.1-201ENST00000606796 927 ntBASIC13.32□□□□□ -0.28
HIST1H3AP68431 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC13.32□□□□□ -0.28
HIST1H3AP68431 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H3AP68431 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
HIST1H3AP68431 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H3AP68431 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H3AP68431 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
HIST1H3AP68431 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H3AP68431 C8orf49-201ENST00000525043 1968 ntBASIC13.32□□□□□ -0.28
HIST1H3AP68431 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H3AP68431 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.32□□□□□ -0.28
HIST1H3AP68431 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
HIST1H3AP68431 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H3AP68431 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.32□□□□□ -0.28
HIST1H3AP68431 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H3AP68431 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.32□□□□□ -0.28
HIST1H3AP68431 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
HIST1H3AP68431 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H3AP68431 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H3AP68431 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H3AP68431 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
HIST1H3AP68431 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.32□□□□□ -0.28
HIST1H3AP68431 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H3AP68431 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HIST1H3AP68431 AC232323.1-201ENST00000540724 2099 ntBASIC13.32□□□□□ -0.28
HIST1H3AP68431 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
HIST1H3AP68431 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.31□□□□□ -0.28
HIST1H3AP68431 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H3AP68431 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H3AP68431 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H3AP68431 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H3AP68431 AC106881.1-201ENST00000605849 3329 ntBASIC13.31□□□□□ -0.28
HIST1H3AP68431 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H3AP68431 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H3AP68431 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.31□□□□□ -0.28
HIST1H3AP68431 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H3AP68431 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.31□□□□□ -0.28
HIST1H3AP68431 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.31□□□□□ -0.28
HIST1H3AP68431 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H3AP68431 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H3AP68431 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H3AP68431 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H3AP68431 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H3AP68431 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.31□□□□□ -0.28
HIST1H3AP68431 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HIST1H3AP68431 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.31□□□□□ -0.28
HIST1H3AP68431 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC13.31□□□□□ -0.28
HIST1H3AP68431 C1QBPP1-201ENST00000400117 770 ntBASIC13.31□□□□□ -0.28
HIST1H3AP68431 AL139094.1-201ENST00000405549 1188 ntBASIC13.31□□□□□ -0.28
HIST1H3AP68431 AC087499.6-201ENST00000411576 835 ntBASIC13.31□□□□□ -0.28
HIST1H3AP68431 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.31□□□□□ -0.28
HIST1H3AP68431 BCRP1-201ENST00000444246 691 ntBASIC13.31□□□□□ -0.28
HIST1H3AP68431 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.31□□□□□ -0.28
HIST1H3AP68431 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.31□□□□□ -0.28
HIST1H3AP68431 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.31□□□□□ -0.28
HIST1H3AP68431 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC13.31□□□□□ -0.28
HIST1H3AP68431 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.31□□□□□ -0.28
HIST1H3AP68431 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.31□□□□□ -0.28
HIST1H3AP68431 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.31□□□□□ -0.28
HIST1H3AP68431 SPCS2P1-201ENST00000561636 679 ntBASIC13.31□□□□□ -0.28
HIST1H3AP68431 DUX4L47-201ENST00000566374 394 ntBASIC13.31□□□□□ -0.28
HIST1H3AP68431 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC13.31□□□□□ -0.28
HIST1H3AP68431 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.31□□□□□ -0.28
HIST1H3AP68431 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.31□□□□□ -0.28
HIST1H3AP68431 AL132655.2-201ENST00000596276 594 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms