Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH12P55289 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH12P55289 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDH12P55289 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH12P55289 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH12P55289 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH12P55289 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH12P55289 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDH12P55289 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
CDH12P55289 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH12P55289 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDH12P55289 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDH12P55289 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
CDH12P55289 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CDH12P55289 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH12P55289 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH12P55289 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH12P55289 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH12P55289 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH12P55289 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
CDH12P55289 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDH12P55289 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.26□□□□□ -0.13
CDH12P55289 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH12P55289 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH12P55289 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH12P55289 SERBP1P3-201ENST00000459980 809 ntBASIC14.26□□□□□ -0.13
CDH12P55289 HLA-J-203ENST00000494367 1087 ntBASIC14.26□□□□□ -0.13
CDH12P55289 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.26□□□□□ -0.13
CDH12P55289 SLED1-202ENST00000512051 380 ntBASIC14.26□□□□□ -0.13
CDH12P55289 AC109322.1-201ENST00000524499 1264 ntBASIC14.26□□□□□ -0.13
CDH12P55289 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.26□□□□□ -0.13
CDH12P55289 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
CDH12P55289 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.26□□□□□ -0.13
CDH12P55289 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH12P55289 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH12P55289 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.26□□□□□ -0.13
CDH12P55289 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.26□□□□□ -0.13
CDH12P55289 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH12P55289 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH12P55289 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH12P55289 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH12P55289 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH12P55289 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CDH12P55289 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH12P55289 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH12P55289 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH12P55289 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH12P55289 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH12P55289 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDH12P55289 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH12P55289 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH12P55289 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.26□□□□□ -0.13
CDH12P55289 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDH12P55289 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH12P55289 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.26□□□□□ -0.13
CDH12P55289 Z97205.2-201ENST00000564697 1639 ntBASIC14.26□□□□□ -0.13
CDH12P55289 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
CDH12P55289 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH12P55289 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
CDH12P55289 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH12P55289 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.26□□□□□ -0.13
CDH12P55289 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
CDH12P55289 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.25□□□□□ -0.13
CDH12P55289 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH12P55289 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDH12P55289 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.25□□□□□ -0.13
CDH12P55289 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH12P55289 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CDH12P55289 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CDH12P55289 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CDH12P55289 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH12P55289 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CDH12P55289 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
CDH12P55289 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH12P55289 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDH12P55289 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CDH12P55289 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH12P55289 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH12P55289 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH12P55289 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.25□□□□□ -0.13
CDH12P55289 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.25□□□□□ -0.13
CDH12P55289 KRT18P64-201ENST00000434946 1219 ntBASIC14.25□□□□□ -0.13
CDH12P55289 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH12P55289 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.25□□□□□ -0.13
CDH12P55289 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.25□□□□□ -0.13
CDH12P55289 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.25□□□□□ -0.13
CDH12P55289 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.25□□□□□ -0.13
CDH12P55289 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDH12P55289 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH12P55289 CALM1-205ENST00000553542 877 ntTSL 5 BASIC14.25□□□□□ -0.13
CDH12P55289 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDH12P55289 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.25□□□□□ -0.13
CDH12P55289 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.25□□□□□ -0.13
CDH12P55289 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CDH12P55289 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
CDH12P55289 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
CDH12P55289 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
CDH12P55289 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
CDH12P55289 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
CDH12P55289 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms