Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NCKAP1LP55160 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NCKAP1LP55160 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NCKAP1LP55160 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NCKAP1LP55160 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
NCKAP1LP55160 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
NCKAP1LP55160 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NCKAP1LP55160 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NCKAP1LP55160 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NCKAP1LP55160 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NCKAP1LP55160 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
NCKAP1LP55160 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
NCKAP1LP55160 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
NCKAP1LP55160 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
NCKAP1LP55160 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCKAP1LP55160 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
NCKAP1LP55160 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NCKAP1LP55160 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.61■□□□□ 0.25
NCKAP1LP55160 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCKAP1LP55160 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.61■□□□□ 0.25
NCKAP1LP55160 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
NCKAP1LP55160 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCKAP1LP55160 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.61■□□□□ 0.25
NCKAP1LP55160 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
NCKAP1LP55160 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NCKAP1LP55160 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCKAP1LP55160 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCKAP1LP55160 TNRC18P2-201ENST00000417666 2714 ntBASIC16.61■□□□□ 0.25
NCKAP1LP55160 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCKAP1LP55160 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCKAP1LP55160 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCKAP1LP55160 ANKRD19P-201ENST00000338192 862 ntBASIC16.61■□□□□ 0.25
NCKAP1LP55160 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.61■□□□□ 0.25
NCKAP1LP55160 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC16.61■□□□□ 0.25
NCKAP1LP55160 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NCKAP1LP55160 WBP2-203ENST00000433525 928 ntTSL 2 BASIC16.61■□□□□ 0.25
NCKAP1LP55160 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
NCKAP1LP55160 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCKAP1LP55160 AC234783.1-201ENST00000441761 496 ntBASIC16.61■□□□□ 0.25
NCKAP1LP55160 FO681548.1-201ENST00000455617 1132 ntBASIC16.61■□□□□ 0.25
NCKAP1LP55160 AL590640.2-201ENST00000457038 527 ntBASIC16.61■□□□□ 0.25
NCKAP1LP55160 GPR53P-205ENST00000457298 1084 ntBASIC16.61■□□□□ 0.25
NCKAP1LP55160 RNA5SP486-201ENST00000515961 83 ntBASIC16.61■□□□□ 0.25
NCKAP1LP55160 RPL8-205ENST00000527914 551 ntTSL 3 BASIC16.61■□□□□ 0.25
NCKAP1LP55160 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC16.61■□□□□ 0.25
NCKAP1LP55160 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.61■□□□□ 0.25
NCKAP1LP55160 SNX29P1-201ENST00000548357 1007 ntBASIC16.61■□□□□ 0.25
NCKAP1LP55160 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.61■□□□□ 0.25
NCKAP1LP55160 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.61■□□□□ 0.25
NCKAP1LP55160 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCKAP1LP55160 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCKAP1LP55160 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
NCKAP1LP55160 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
NCKAP1LP55160 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NCKAP1LP55160 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCKAP1LP55160 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NCKAP1LP55160 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.61■□□□□ 0.25
NCKAP1LP55160 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
NCKAP1LP55160 AC023824.1-201ENST00000562945 2975 ntBASIC16.61■□□□□ 0.25
NCKAP1LP55160 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.61■□□□□ 0.25
NCKAP1LP55160 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCKAP1LP55160 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCKAP1LP55160 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
NCKAP1LP55160 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCKAP1LP55160 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCKAP1LP55160 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
NCKAP1LP55160 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.61■□□□□ 0.25
NCKAP1LP55160 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
NCKAP1LP55160 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.61■□□□□ 0.25
NCKAP1LP55160 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCKAP1LP55160 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NCKAP1LP55160 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NCKAP1LP55160 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.6■□□□□ 0.25
NCKAP1LP55160 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
NCKAP1LP55160 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
NCKAP1LP55160 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCKAP1LP55160 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCKAP1LP55160 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCKAP1LP55160 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NCKAP1LP55160 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCKAP1LP55160 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCKAP1LP55160 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCKAP1LP55160 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
NCKAP1LP55160 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NCKAP1LP55160 MIR1909-201ENST00000411312 80 ntBASIC16.6■□□□□ 0.25
NCKAP1LP55160 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NCKAP1LP55160 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.6■□□□□ 0.25
NCKAP1LP55160 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
NCKAP1LP55160 RPL7P3-201ENST00000441388 714 ntBASIC16.6■□□□□ 0.25
NCKAP1LP55160 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.6■□□□□ 0.25
NCKAP1LP55160 MESTP3-201ENST00000503460 968 ntBASIC16.6■□□□□ 0.25
NCKAP1LP55160 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
NCKAP1LP55160 AC078819.1-201ENST00000547454 765 ntBASIC16.6■□□□□ 0.25
NCKAP1LP55160 AC012085.1-201ENST00000548270 765 ntBASIC16.6■□□□□ 0.25
NCKAP1LP55160 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.6■□□□□ 0.25
NCKAP1LP55160 ECM1P1-201ENST00000604092 1279 ntBASIC16.6■□□□□ 0.25
NCKAP1LP55160 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
NCKAP1LP55160 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.6■□□□□ 0.25
NCKAP1LP55160 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.6■□□□□ 0.25
NCKAP1LP55160 CLUHP2-201ENST00000426660 1303 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms