Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NUP98P52948 ACE3P-201ENST00000423435 1973 ntBASIC18.5■□□□□ 0.55
NUP98P52948 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
NUP98P52948 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC18.49■□□□□ 0.55
NUP98P52948 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
NUP98P52948 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NUP98P52948 KRT18P9-201ENST00000604826 1300 ntBASIC18.49■□□□□ 0.55
NUP98P52948 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.49■□□□□ 0.55
NUP98P52948 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
NUP98P52948 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.49■□□□□ 0.55
NUP98P52948 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NUP98P52948 AC104784.1-201ENST00000473096 294 ntBASIC18.49■□□□□ 0.55
NUP98P52948 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NUP98P52948 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NUP98P52948 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC18.49■□□□□ 0.55
NUP98P52948 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NUP98P52948 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC18.49■□□□□ 0.55
NUP98P52948 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NUP98P52948 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NUP98P52948 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NUP98P52948 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
NUP98P52948 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC18.49■□□□□ 0.55
NUP98P52948 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.49■□□□□ 0.55
NUP98P52948 AL109954.1-202ENST00000564051 2148 ntBASIC18.49■□□□□ 0.55
NUP98P52948 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
NUP98P52948 PGR-210ENST00000619228 3038 ntTSL 5 BASIC18.49■□□□□ 0.55
NUP98P52948 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
NUP98P52948 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NUP98P52948 STK26-204ENST00000481105 1835 ntTSL 2 BASIC18.49■□□□□ 0.55
NUP98P52948 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC18.49■□□□□ 0.55
NUP98P52948 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
NUP98P52948 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NUP98P52948 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC18.49■□□□□ 0.55
NUP98P52948 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NUP98P52948 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
NUP98P52948 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NUP98P52948 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
NUP98P52948 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NUP98P52948 AC098935.1-201ENST00000446057 611 ntBASIC18.49■□□□□ 0.55
NUP98P52948 CTBP2P4-201ENST00000513884 920 ntBASIC18.49■□□□□ 0.55
NUP98P52948 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC18.49■□□□□ 0.55
NUP98P52948 IGHVIII-5-2-201ENST00000522505 261 ntBASIC18.49■□□□□ 0.55
NUP98P52948 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC18.49■□□□□ 0.55
NUP98P52948 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC18.49■□□□□ 0.55
NUP98P52948 TMCO5B-205ENST00000530020 894 ntBASIC18.49■□□□□ 0.55
NUP98P52948 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
NUP98P52948 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
NUP98P52948 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC18.49■□□□□ 0.55
NUP98P52948 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC18.49■□□□□ 0.55
NUP98P52948 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC18.49■□□□□ 0.55
NUP98P52948 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC18.49■□□□□ 0.55
NUP98P52948 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NUP98P52948 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NUP98P52948 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
NUP98P52948 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NUP98P52948 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
NUP98P52948 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
NUP98P52948 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
NUP98P52948 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
NUP98P52948 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
NUP98P52948 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NUP98P52948 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC18.48■□□□□ 0.55
NUP98P52948 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC18.48■□□□□ 0.55
NUP98P52948 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NUP98P52948 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NUP98P52948 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC18.48■□□□□ 0.55
NUP98P52948 RPSAP31-201ENST00000416648 895 ntBASIC18.48■□□□□ 0.55
NUP98P52948 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC18.48■□□□□ 0.55
NUP98P52948 NAGK-204ENST00000443872 878 ntTSL 3 BASIC18.48■□□□□ 0.55
NUP98P52948 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC18.48■□□□□ 0.55
NUP98P52948 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
NUP98P52948 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC18.48■□□□□ 0.55
NUP98P52948 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
NUP98P52948 AC007881.3-201ENST00000608897 607 ntBASIC18.48■□□□□ 0.55
NUP98P52948 RN7SL736P-201ENST00000613111 269 ntBASIC18.48■□□□□ 0.55
NUP98P52948 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NUP98P52948 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC18.48■□□□□ 0.55
NUP98P52948 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC18.48■□□□□ 0.55
NUP98P52948 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NUP98P52948 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC18.48■□□□□ 0.55
NUP98P52948 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.48■□□□□ 0.55
NUP98P52948 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.48■□□□□ 0.55
NUP98P52948 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NUP98P52948 AC138035.3-201ENST00000622706 2791 ntBASIC18.48■□□□□ 0.55
NUP98P52948 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NUP98P52948 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NUP98P52948 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
NUP98P52948 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NUP98P52948 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
NUP98P52948 AHCYP4-201ENST00000419201 1315 ntBASIC18.47■□□□□ 0.55
NUP98P52948 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NUP98P52948 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.47■□□□□ 0.55
NUP98P52948 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NUP98P52948 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
NUP98P52948 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC18.47■□□□□ 0.55
NUP98P52948 FTH1P22-201ENST00000456305 520 ntBASIC18.47■□□□□ 0.55
NUP98P52948 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC18.47■□□□□ 0.55
NUP98P52948 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC18.47■□□□□ 0.55
NUP98P52948 LY6E-208ENST00000520531 490 ntTSL 2 BASIC18.47■□□□□ 0.55
NUP98P52948 CFL1-206ENST00000527344 962 ntTSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms