Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMGA2P52926 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
HMGA2P52926 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMGA2P52926 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMGA2P52926 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMGA2P52926 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMGA2P52926 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMGA2P52926 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.88□□□□□ -0.19
HMGA2P52926 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HMGA2P52926 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.88□□□□□ -0.19
HMGA2P52926 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.88□□□□□ -0.19
HMGA2P52926 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.88□□□□□ -0.19
HMGA2P52926 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMGA2P52926 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC13.88□□□□□ -0.19
HMGA2P52926 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMGA2P52926 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.88□□□□□ -0.19
HMGA2P52926 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.88□□□□□ -0.19
HMGA2P52926 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
HMGA2P52926 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
HMGA2P52926 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMGA2P52926 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.88□□□□□ -0.19
HMGA2P52926 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HMGA2P52926 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HMGA2P52926 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMGA2P52926 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMGA2P52926 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HMGA2P52926 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMGA2P52926 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMGA2P52926 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
HMGA2P52926 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
HMGA2P52926 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
HMGA2P52926 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMGA2P52926 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HMGA2P52926 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMGA2P52926 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMGA2P52926 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
HMGA2P52926 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
HMGA2P52926 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMGA2P52926 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMGA2P52926 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMGA2P52926 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
HMGA2P52926 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HMGA2P52926 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMGA2P52926 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HMGA2P52926 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMGA2P52926 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMGA2P52926 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
HMGA2P52926 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.87□□□□□ -0.19
HMGA2P52926 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HMGA2P52926 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
HMGA2P52926 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HMGA2P52926 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HMGA2P52926 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HMGA2P52926 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMGA2P52926 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMGA2P52926 INE2-201ENST00000630399 1874 ntBASIC13.87□□□□□ -0.19
HMGA2P52926 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMGA2P52926 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.87□□□□□ -0.19
HMGA2P52926 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.87□□□□□ -0.19
HMGA2P52926 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMGA2P52926 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.87□□□□□ -0.19
HMGA2P52926 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.87□□□□□ -0.19
HMGA2P52926 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMGA2P52926 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.87□□□□□ -0.19
HMGA2P52926 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HMGA2P52926 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
HMGA2P52926 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.87□□□□□ -0.19
HMGA2P52926 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.87□□□□□ -0.19
HMGA2P52926 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.87□□□□□ -0.19
HMGA2P52926 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
HMGA2P52926 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.87□□□□□ -0.19
HMGA2P52926 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC13.87□□□□□ -0.19
HMGA2P52926 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.87□□□□□ -0.19
HMGA2P52926 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.87□□□□□ -0.19
HMGA2P52926 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.87□□□□□ -0.19
HMGA2P52926 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.87□□□□□ -0.19
HMGA2P52926 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMGA2P52926 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.87□□□□□ -0.19
HMGA2P52926 AC092337.1-201ENST00000568699 1129 ntBASIC13.87□□□□□ -0.19
HMGA2P52926 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.87□□□□□ -0.19
HMGA2P52926 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HMGA2P52926 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.87□□□□□ -0.19
HMGA2P52926 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.87□□□□□ -0.19
HMGA2P52926 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMGA2P52926 AL138828.2-201ENST00000615812 383 ntBASIC13.87□□□□□ -0.19
HMGA2P52926 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.87□□□□□ -0.19
HMGA2P52926 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMGA2P52926 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HMGA2P52926 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
HMGA2P52926 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMGA2P52926 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMGA2P52926 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HMGA2P52926 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMGA2P52926 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMGA2P52926 KRT8P22-201ENST00000562317 1415 ntBASIC13.87□□□□□ -0.19
HMGA2P52926 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.87□□□□□ -0.19
HMGA2P52926 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HMGA2P52926 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.87□□□□□ -0.19
HMGA2P52926 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
HMGA2P52926 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms