Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 AL450472.2-201ENST00000603663 1156 ntBASIC14.37□□□□□ -0.11
SMSP52788 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.37□□□□□ -0.11
SMSP52788 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.37□□□□□ -0.11
SMSP52788 AC139749.1-202ENST00000617529 3139 ntBASIC14.37□□□□□ -0.11
SMSP52788 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SMSP52788 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.37□□□□□ -0.11
SMSP52788 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMSP52788 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SMSP52788 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMSP52788 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SMSP52788 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.37□□□□□ -0.11
SMSP52788 AC005089.1-201ENST00000619486 2241 ntBASIC14.37□□□□□ -0.11
SMSP52788 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.37□□□□□ -0.11
SMSP52788 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SMSP52788 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMSP52788 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SMSP52788 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SMSP52788 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMSP52788 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMSP52788 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMSP52788 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMSP52788 FGD5P1-202ENST00000614866 2498 ntBASIC14.36□□□□□ -0.11
SMSP52788 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMSP52788 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.36□□□□□ -0.11
SMSP52788 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMSP52788 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMSP52788 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.36□□□□□ -0.11
SMSP52788 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.36□□□□□ -0.11
SMSP52788 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMSP52788 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMSP52788 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.36□□□□□ -0.11
SMSP52788 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.36□□□□□ -0.11
SMSP52788 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMSP52788 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SMSP52788 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMSP52788 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
SMSP52788 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SMSP52788 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SMSP52788 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.36□□□□□ -0.11
SMSP52788 BOLA2P3-201ENST00000404566 256 ntBASIC14.36□□□□□ -0.11
SMSP52788 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.36□□□□□ -0.11
SMSP52788 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMSP52788 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SMSP52788 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SMSP52788 AC133552.6-201ENST00000613406 534 ntBASIC14.36□□□□□ -0.11
SMSP52788 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMSP52788 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.36□□□□□ -0.11
SMSP52788 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SMSP52788 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.36□□□□□ -0.11
SMSP52788 AC026748.1-201ENST00000624349 3251 ntBASIC14.36□□□□□ -0.11
SMSP52788 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.36□□□□□ -0.11
SMSP52788 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
SMSP52788 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SMSP52788 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.36□□□□□ -0.11
SMSP52788 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
SMSP52788 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
SMSP52788 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.36□□□□□ -0.11
SMSP52788 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SMSP52788 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SMSP52788 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
SMSP52788 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMSP52788 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.35□□□□□ -0.11
SMSP52788 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
SMSP52788 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SMSP52788 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMSP52788 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.35□□□□□ -0.11
SMSP52788 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMSP52788 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMSP52788 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMSP52788 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMSP52788 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SMSP52788 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMSP52788 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.35□□□□□ -0.11
SMSP52788 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.35□□□□□ -0.11
SMSP52788 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.35□□□□□ -0.11
SMSP52788 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMSP52788 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMSP52788 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMSP52788 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC14.35□□□□□ -0.11
SMSP52788 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMSP52788 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMSP52788 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SMSP52788 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
SMSP52788 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMSP52788 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.35□□□□□ -0.11
SMSP52788 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.35□□□□□ -0.11
SMSP52788 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMSP52788 SPDYE18-201ENST00000510091 1050 ntBASIC14.35□□□□□ -0.11
SMSP52788 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
SMSP52788 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMSP52788 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.35□□□□□ -0.11
SMSP52788 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMSP52788 AL109936.8-201ENST00000641772 604 ntBASIC14.35□□□□□ -0.11
SMSP52788 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
SMSP52788 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.35□□□□□ -0.11
SMSP52788 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.35□□□□□ -0.11
SMSP52788 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMSP52788 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMSP52788 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMSP52788 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms