Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.17□□□□□ -0.3
HCFC1P51610 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC13.17□□□□□ -0.3
HCFC1P51610 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.17□□□□□ -0.3
HCFC1P51610 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
HCFC1P51610 AL161670.2-201ENST00000557650 1227 ntBASIC13.17□□□□□ -0.3
HCFC1P51610 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC13.17□□□□□ -0.3
HCFC1P51610 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.17□□□□□ -0.3
HCFC1P51610 AC009955.4-201ENST00000597192 544 ntBASIC13.17□□□□□ -0.3
HCFC1P51610 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HCFC1P51610 AL136295.7-201ENST00000619226 1200 ntBASIC13.17□□□□□ -0.3
HCFC1P51610 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC13.17□□□□□ -0.3
HCFC1P51610 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.17□□□□□ -0.3
HCFC1P51610 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
HCFC1P51610 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HCFC1P51610 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
HCFC1P51610 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HCFC1P51610 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
HCFC1P51610 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
HCFC1P51610 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HCFC1P51610 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HCFC1P51610 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HCFC1P51610 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HCFC1P51610 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HCFC1P51610 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
HCFC1P51610 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HCFC1P51610 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HCFC1P51610 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HCFC1P51610 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HCFC1P51610 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.16□□□□□ -0.3
HCFC1P51610 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HCFC1P51610 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HCFC1P51610 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HCFC1P51610 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HCFC1P51610 AP000593.2-201ENST00000542775 1433 ntBASIC13.16□□□□□ -0.3
HCFC1P51610 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC13.16□□□□□ -0.3
HCFC1P51610 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HCFC1P51610 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HCFC1P51610 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HCFC1P51610 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC13.16□□□□□ -0.3
HCFC1P51610 RPL5P21-201ENST00000404620 815 ntBASIC13.16□□□□□ -0.3
HCFC1P51610 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HCFC1P51610 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.16□□□□□ -0.3
HCFC1P51610 MBP-227ENST00000526111 581 ntTSL 4 BASIC13.16□□□□□ -0.3
HCFC1P51610 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HCFC1P51610 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC13.16□□□□□ -0.3
HCFC1P51610 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC13.16□□□□□ -0.3
HCFC1P51610 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.16□□□□□ -0.3
HCFC1P51610 AC132192.2-201ENST00000596206 1147 ntBASIC13.16□□□□□ -0.3
HCFC1P51610 AL353726.2-201ENST00000623259 884 ntBASIC13.16□□□□□ -0.3
HCFC1P51610 AC002472.3-201ENST00000640124 621 ntBASIC13.16□□□□□ -0.3
HCFC1P51610 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
HCFC1P51610 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
HCFC1P51610 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HCFC1P51610 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HCFC1P51610 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HCFC1P51610 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HCFC1P51610 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HCFC1P51610 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HCFC1P51610 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HCFC1P51610 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HCFC1P51610 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HCFC1P51610 AC092850.2-201ENST00000623821 2697 ntBASIC13.16□□□□□ -0.3
HCFC1P51610 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HCFC1P51610 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HCFC1P51610 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
HCFC1P51610 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
HCFC1P51610 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HCFC1P51610 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HCFC1P51610 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HCFC1P51610 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HCFC1P51610 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
HCFC1P51610 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HCFC1P51610 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.15□□□□□ -0.3
HCFC1P51610 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.15□□□□□ -0.3
HCFC1P51610 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HCFC1P51610 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
HCFC1P51610 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HCFC1P51610 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC13.15□□□□□ -0.3
HCFC1P51610 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HCFC1P51610 AC069218.1-201ENST00000435269 762 ntBASIC13.15□□□□□ -0.3
HCFC1P51610 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC13.15□□□□□ -0.3
HCFC1P51610 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC13.15□□□□□ -0.3
HCFC1P51610 AC024681.1-201ENST00000521917 487 ntBASIC13.15□□□□□ -0.3
HCFC1P51610 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HCFC1P51610 IQSEC3P1-201ENST00000538799 536 ntBASIC13.15□□□□□ -0.3
HCFC1P51610 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.15□□□□□ -0.3
HCFC1P51610 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.15□□□□□ -0.3
HCFC1P51610 AP003419.4-201ENST00000616071 517 ntBASIC13.15□□□□□ -0.3
HCFC1P51610 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC13.15□□□□□ -0.3
HCFC1P51610 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.15□□□□□ -0.3
HCFC1P51610 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
HCFC1P51610 INE2-201ENST00000630399 1874 ntBASIC13.15□□□□□ -0.3
HCFC1P51610 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HCFC1P51610 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
HCFC1P51610 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.15□□□□□ -0.3
HCFC1P51610 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HCFC1P51610 AC136621.1-201ENST00000624017 2304 ntBASIC13.15□□□□□ -0.3
HCFC1P51610 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HCFC1P51610 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC13.15□□□□□ -0.3
HCFC1P51610 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms