Protein–RNA interactions for Protein: P51531

SMARCA2, Probable global transcription activator SNF2L2, humanhuman

Predictions only

Length 1,590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2P51531 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC26.16■■□□□ 1.78
SMARCA2P51531 AC093826.1-201ENST00000508655 993 ntBASIC26.16■■□□□ 1.78
SMARCA2P51531 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC26.16■■□□□ 1.78
SMARCA2P51531 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC26.16■■□□□ 1.78
SMARCA2P51531 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC26.16■■□□□ 1.78
SMARCA2P51531 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC26.16■■□□□ 1.78
SMARCA2P51531 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SMARCA2P51531 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SMARCA2P51531 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SMARCA2P51531 AC009093.10-201ENST00000641956 1442 ntBASIC26.16■■□□□ 1.78
SMARCA2P51531 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
SMARCA2P51531 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
SMARCA2P51531 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC26.16■■□□□ 1.78
SMARCA2P51531 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC26.16■■□□□ 1.78
SMARCA2P51531 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC26.16■■□□□ 1.78
SMARCA2P51531 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SMARCA2P51531 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
SMARCA2P51531 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC26.16■■□□□ 1.78
SMARCA2P51531 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC26.16■■□□□ 1.78
SMARCA2P51531 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC26.16■■□□□ 1.78
SMARCA2P51531 IGHVIII-5-2-201ENST00000522505 261 ntBASIC26.16■■□□□ 1.78
SMARCA2P51531 FAM86B3P-203ENST00000523992 854 ntBASIC26.16■■□□□ 1.78
SMARCA2P51531 RPS5-204ENST00000598098 536 ntTSL 2 BASIC26.16■■□□□ 1.78
SMARCA2P51531 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SMARCA2P51531 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC26.15■■□□□ 1.78
SMARCA2P51531 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
SMARCA2P51531 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC26.15■■□□□ 1.78
SMARCA2P51531 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC26.15■■□□□ 1.78
SMARCA2P51531 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
SMARCA2P51531 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SMARCA2P51531 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SMARCA2P51531 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC26.15■■□□□ 1.78
SMARCA2P51531 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SMARCA2P51531 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
SMARCA2P51531 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC26.15■■□□□ 1.78
SMARCA2P51531 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
SMARCA2P51531 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC26.15■■□□□ 1.78
SMARCA2P51531 RPL18AP8-201ENST00000486071 528 ntBASIC26.15■■□□□ 1.78
SMARCA2P51531 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC26.15■■□□□ 1.78
SMARCA2P51531 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC26.15■■□□□ 1.78
SMARCA2P51531 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC26.15■■□□□ 1.78
SMARCA2P51531 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC26.15■■□□□ 1.78
SMARCA2P51531 PLS3-210ENST00000626746 216 ntTSL 4 BASIC26.15■■□□□ 1.78
SMARCA2P51531 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
SMARCA2P51531 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC26.15■■□□□ 1.78
SMARCA2P51531 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SMARCA2P51531 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC26.14■■□□□ 1.78
SMARCA2P51531 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
SMARCA2P51531 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SMARCA2P51531 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SMARCA2P51531 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC26.14■■□□□ 1.78
SMARCA2P51531 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC26.14■■□□□ 1.78
SMARCA2P51531 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC26.14■■□□□ 1.78
SMARCA2P51531 RGS5-216ENST00000449680 788 ntTSL 3 BASIC26.14■■□□□ 1.78
SMARCA2P51531 HERC2P11-201ENST00000562845 725 ntBASIC26.14■■□□□ 1.78
SMARCA2P51531 AC100756.2-201ENST00000569537 736 ntBASIC26.14■■□□□ 1.78
SMARCA2P51531 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC26.14■■□□□ 1.78
SMARCA2P51531 AC007250.1-201ENST00000608934 338 ntBASIC26.14■■□□□ 1.78
SMARCA2P51531 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
SMARCA2P51531 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SMARCA2P51531 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.77
SMARCA2P51531 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC26.14■■□□□ 1.77
SMARCA2P51531 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC26.14■■□□□ 1.77
SMARCA2P51531 API5-208ENST00000531273 1868 ntTSL 2 BASIC26.14■■□□□ 1.77
SMARCA2P51531 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC26.14■■□□□ 1.77
SMARCA2P51531 AP000845.1-201ENST00000581677 2131 ntBASIC26.14■■□□□ 1.77
SMARCA2P51531 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC26.14■■□□□ 1.77
SMARCA2P51531 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
SMARCA2P51531 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SMARCA2P51531 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC26.13■■□□□ 1.77
SMARCA2P51531 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SMARCA2P51531 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
SMARCA2P51531 PYY2-201ENST00000315776 282 ntBASIC26.13■■□□□ 1.77
SMARCA2P51531 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC26.13■■□□□ 1.77
SMARCA2P51531 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC26.13■■□□□ 1.77
SMARCA2P51531 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC26.13■■□□□ 1.77
SMARCA2P51531 CSNK1G2P1-201ENST00000442675 955 ntBASIC26.13■■□□□ 1.77
SMARCA2P51531 RN7SL23P-201ENST00000484055 275 ntBASIC26.13■■□□□ 1.77
SMARCA2P51531 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC26.13■■□□□ 1.77
SMARCA2P51531 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC26.13■■□□□ 1.77
SMARCA2P51531 ELP5-212ENST00000574255 671 ntTSL 2 BASIC26.13■■□□□ 1.77
SMARCA2P51531 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC26.13■■□□□ 1.77
SMARCA2P51531 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
SMARCA2P51531 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SMARCA2P51531 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC26.13■■□□□ 1.77
SMARCA2P51531 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
SMARCA2P51531 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC26.13■■□□□ 1.77
SMARCA2P51531 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
SMARCA2P51531 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SMARCA2P51531 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
SMARCA2P51531 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
SMARCA2P51531 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC26.12■■□□□ 1.77
SMARCA2P51531 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SMARCA2P51531 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SMARCA2P51531 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC26.12■■□□□ 1.77
SMARCA2P51531 OR5BD1P-201ENST00000532527 817 ntBASIC26.12■■□□□ 1.77
SMARCA2P51531 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC26.12■■□□□ 1.77
SMARCA2P51531 R3HDM2P2-201ENST00000401880 2116 ntBASIC26.12■■□□□ 1.77
SMARCA2P51531 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC26.12■■□□□ 1.77
SMARCA2P51531 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms