Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RNF144AP50876 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
RNF144AP50876 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.25□□□□□ -0.13
RNF144AP50876 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
RNF144AP50876 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.25□□□□□ -0.13
RNF144AP50876 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
RNF144AP50876 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RNF144AP50876 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RNF144AP50876 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
RNF144AP50876 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RNF144AP50876 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.25□□□□□ -0.13
RNF144AP50876 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RNF144AP50876 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RNF144AP50876 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.25□□□□□ -0.13
RNF144AP50876 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RNF144AP50876 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.25□□□□□ -0.13
RNF144AP50876 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RNF144AP50876 AC026748.1-201ENST00000624349 3251 ntBASIC14.25□□□□□ -0.13
RNF144AP50876 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.24□□□□□ -0.13
RNF144AP50876 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RNF144AP50876 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF144AP50876 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.24□□□□□ -0.13
RNF144AP50876 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF144AP50876 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF144AP50876 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
RNF144AP50876 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF144AP50876 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF144AP50876 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF144AP50876 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF144AP50876 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.24□□□□□ -0.13
RNF144AP50876 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RNF144AP50876 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF144AP50876 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.24□□□□□ -0.13
RNF144AP50876 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF144AP50876 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RNF144AP50876 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
RNF144AP50876 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF144AP50876 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.24□□□□□ -0.13
RNF144AP50876 AL133267.1-201ENST00000398220 340 ntBASIC14.24□□□□□ -0.13
RNF144AP50876 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.24□□□□□ -0.13
RNF144AP50876 TOMM22P5-201ENST00000416399 439 ntBASIC14.24□□□□□ -0.13
RNF144AP50876 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.24□□□□□ -0.13
RNF144AP50876 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.24□□□□□ -0.13
RNF144AP50876 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.24□□□□□ -0.13
RNF144AP50876 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
RNF144AP50876 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.24□□□□□ -0.13
RNF144AP50876 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.24□□□□□ -0.13
RNF144AP50876 AC092337.1-201ENST00000568699 1129 ntBASIC14.24□□□□□ -0.13
RNF144AP50876 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.24□□□□□ -0.13
RNF144AP50876 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.24□□□□□ -0.13
RNF144AP50876 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.24□□□□□ -0.13
RNF144AP50876 AC022726.2-201ENST00000634673 547 ntBASIC14.24□□□□□ -0.13
RNF144AP50876 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RNF144AP50876 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF144AP50876 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
RNF144AP50876 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
RNF144AP50876 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
RNF144AP50876 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF144AP50876 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.24□□□□□ -0.13
RNF144AP50876 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.24□□□□□ -0.13
RNF144AP50876 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF144AP50876 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
RNF144AP50876 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RNF144AP50876 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF144AP50876 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF144AP50876 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF144AP50876 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF144AP50876 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.23□□□□□ -0.13
RNF144AP50876 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.23□□□□□ -0.13
RNF144AP50876 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF144AP50876 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RNF144AP50876 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.23□□□□□ -0.13
RNF144AP50876 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
RNF144AP50876 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF144AP50876 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF144AP50876 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.23□□□□□ -0.13
RNF144AP50876 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF144AP50876 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF144AP50876 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RNF144AP50876 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF144AP50876 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.23□□□□□ -0.13
RNF144AP50876 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RNF144AP50876 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
RNF144AP50876 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF144AP50876 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF144AP50876 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RNF144AP50876 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
RNF144AP50876 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.23□□□□□ -0.13
RNF144AP50876 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.23□□□□□ -0.13
RNF144AP50876 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
RNF144AP50876 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RNF144AP50876 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.23□□□□□ -0.13
RNF144AP50876 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.23□□□□□ -0.13
RNF144AP50876 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
RNF144AP50876 TSPY16P-201ENST00000449843 468 ntBASIC14.23□□□□□ -0.13
RNF144AP50876 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.23□□□□□ -0.13
RNF144AP50876 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.23□□□□□ -0.13
RNF144AP50876 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
RNF144AP50876 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.23□□□□□ -0.13
RNF144AP50876 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms