Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
SLC1A6P48664 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SLC1A6P48664 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC1A6P48664 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SLC1A6P48664 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SLC1A6P48664 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC1A6P48664 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC1A6P48664 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SLC1A6P48664 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SLC1A6P48664 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
SLC1A6P48664 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC1A6P48664 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SLC1A6P48664 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
SLC1A6P48664 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC1A6P48664 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SLC1A6P48664 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.03■□□□□ -0
SLC1A6P48664 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
SLC1A6P48664 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SLC1A6P48664 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.02■□□□□ -0
SLC1A6P48664 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
SLC1A6P48664 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLC1A6P48664 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.02■□□□□ -0
SLC1A6P48664 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.02■□□□□ -0
SLC1A6P48664 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.02■□□□□ -0
SLC1A6P48664 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLC1A6P48664 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
SLC1A6P48664 AL035456.1-201ENST00000456064 1369 ntBASIC15.02■□□□□ -0
SLC1A6P48664 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.02■□□□□ -0
SLC1A6P48664 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.02■□□□□ -0
SLC1A6P48664 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLC1A6P48664 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLC1A6P48664 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.02■□□□□ -0
SLC1A6P48664 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
SLC1A6P48664 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
SLC1A6P48664 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.02■□□□□ -0
SLC1A6P48664 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SLC1A6P48664 FAM58DP-201ENST00000428076 619 ntBASIC15.02■□□□□ -0
SLC1A6P48664 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.02■□□□□ -0
SLC1A6P48664 TPT1P11-201ENST00000458482 498 ntBASIC15.02■□□□□ -0
SLC1A6P48664 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLC1A6P48664 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC15.02■□□□□ -0
SLC1A6P48664 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.02■□□□□ -0
SLC1A6P48664 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.02■□□□□ -0
SLC1A6P48664 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.02■□□□□ -0
SLC1A6P48664 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.02■□□□□ -0
SLC1A6P48664 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.02■□□□□ -0
SLC1A6P48664 AC007967.4-201ENST00000614700 386 ntBASIC15.02■□□□□ -0
SLC1A6P48664 BX640515.1-201ENST00000617215 977 ntBASIC15.02■□□□□ -0
SLC1A6P48664 MIR6069-201ENST00000620069 79 ntBASIC15.02■□□□□ -0
SLC1A6P48664 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
SLC1A6P48664 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC1A6P48664 AL359881.3-201ENST00000602640 1721 ntBASIC15.02□□□□□ -0.01
SLC1A6P48664 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.02□□□□□ -0.01
SLC1A6P48664 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
SLC1A6P48664 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.02□□□□□ -0.01
SLC1A6P48664 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
SLC1A6P48664 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC1A6P48664 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SLC1A6P48664 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.02□□□□□ -0.01
SLC1A6P48664 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
SLC1A6P48664 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC1A6P48664 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.02□□□□□ -0.01
SLC1A6P48664 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SLC1A6P48664 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A6P48664 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A6P48664 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A6P48664 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A6P48664 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A6P48664 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SLC1A6P48664 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A6P48664 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A6P48664 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A6P48664 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.01□□□□□ -0.01
SLC1A6P48664 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A6P48664 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A6P48664 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A6P48664 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A6P48664 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A6P48664 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A6P48664 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.01□□□□□ -0.01
SLC1A6P48664 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A6P48664 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SLC1A6P48664 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SLC1A6P48664 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A6P48664 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
SLC1A6P48664 KRT18P32-201ENST00000424695 1287 ntBASIC15.01□□□□□ -0.01
SLC1A6P48664 MKNK2P1-201ENST00000437526 628 ntBASIC15.01□□□□□ -0.01
SLC1A6P48664 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.01□□□□□ -0.01
SLC1A6P48664 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A6P48664 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.01□□□□□ -0.01
SLC1A6P48664 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.01□□□□□ -0.01
SLC1A6P48664 AC040169.1-201ENST00000565382 521 ntBASIC15.01□□□□□ -0.01
SLC1A6P48664 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.01□□□□□ -0.01
SLC1A6P48664 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.01□□□□□ -0.01
SLC1A6P48664 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.01□□□□□ -0.01
SLC1A6P48664 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SLC1A6P48664 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A6P48664 AF228730.6-201ENST00000641497 218 ntBASIC15.01□□□□□ -0.01
SLC1A6P48664 AC084121.3-201ENST00000641716 218 ntBASIC15.01□□□□□ -0.01
SLC1A6P48664 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms