Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SSR1P43307 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
SSR1P43307 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.32■□□□□ 0.2
SSR1P43307 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SSR1P43307 AC005252.3-201ENST00000623855 2258 ntBASIC16.32■□□□□ 0.2
SSR1P43307 INTS4P1-203ENST00000641008 3683 ntBASIC16.32■□□□□ 0.2
SSR1P43307 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SSR1P43307 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC16.32■□□□□ 0.2
SSR1P43307 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SSR1P43307 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.32■□□□□ 0.2
SSR1P43307 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SSR1P43307 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SSR1P43307 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SSR1P43307 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC16.32■□□□□ 0.2
SSR1P43307 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SSR1P43307 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SSR1P43307 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SSR1P43307 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC16.31■□□□□ 0.2
SSR1P43307 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SSR1P43307 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSR1P43307 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.31■□□□□ 0.2
SSR1P43307 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SSR1P43307 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SSR1P43307 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC16.31■□□□□ 0.2
SSR1P43307 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSR1P43307 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SSR1P43307 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SSR1P43307 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSR1P43307 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSR1P43307 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSR1P43307 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSR1P43307 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SSR1P43307 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SSR1P43307 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SSR1P43307 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSR1P43307 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SSR1P43307 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.31■□□□□ 0.2
SSR1P43307 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.31■□□□□ 0.2
SSR1P43307 TREML5P-201ENST00000421694 576 ntBASIC16.31■□□□□ 0.2
SSR1P43307 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.31■□□□□ 0.2
SSR1P43307 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.31■□□□□ 0.2
SSR1P43307 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSR1P43307 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SSR1P43307 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.31■□□□□ 0.2
SSR1P43307 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.31■□□□□ 0.2
SSR1P43307 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SSR1P43307 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSR1P43307 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSR1P43307 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSR1P43307 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC16.31■□□□□ 0.2
SSR1P43307 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSR1P43307 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSR1P43307 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.31■□□□□ 0.2
SSR1P43307 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SSR1P43307 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSR1P43307 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SSR1P43307 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SSR1P43307 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
SSR1P43307 AC131212.3-201ENST00000624087 4219 ntBASIC16.3■□□□□ 0.2
SSR1P43307 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSR1P43307 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SSR1P43307 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SSR1P43307 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSR1P43307 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSR1P43307 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSR1P43307 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SSR1P43307 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSR1P43307 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSR1P43307 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SSR1P43307 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SSR1P43307 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.3■□□□□ 0.2
SSR1P43307 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSR1P43307 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSR1P43307 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SSR1P43307 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
SSR1P43307 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SSR1P43307 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSR1P43307 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSR1P43307 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSR1P43307 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SSR1P43307 AC015922.1-201ENST00000421102 1152 ntBASIC16.3■□□□□ 0.2
SSR1P43307 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.3■□□□□ 0.2
SSR1P43307 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSR1P43307 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
SSR1P43307 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.3■□□□□ 0.2
SSR1P43307 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.3■□□□□ 0.2
SSR1P43307 AC010336.2-201ENST00000564226 506 ntBASIC16.3■□□□□ 0.2
SSR1P43307 AC140878.1-201ENST00000565277 250 ntBASIC16.3■□□□□ 0.2
SSR1P43307 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.3■□□□□ 0.2
SSR1P43307 AP001160.2-201ENST00000596071 487 ntBASIC16.3■□□□□ 0.2
SSR1P43307 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC16.3■□□□□ 0.2
SSR1P43307 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.3■□□□□ 0.2
SSR1P43307 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SSR1P43307 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC16.3■□□□□ 0.2
SSR1P43307 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SSR1P43307 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC16.3■□□□□ 0.2
SSR1P43307 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SSR1P43307 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SSR1P43307 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.3■□□□□ 0.2
SSR1P43307 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms