Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC20.9■□□□□ 0.94
CPS1P31327 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC20.9■□□□□ 0.94
CPS1P31327 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC20.9■□□□□ 0.94
CPS1P31327 SKA2-202ENST00000437036 625 ntTSL 2 BASIC20.9■□□□□ 0.94
CPS1P31327 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CPS1P31327 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC20.9■□□□□ 0.94
CPS1P31327 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC20.9■□□□□ 0.94
CPS1P31327 AC138701.2-201ENST00000553634 226 ntBASIC20.9■□□□□ 0.94
CPS1P31327 SRP14-204ENST00000558720 780 ntTSL 2 BASIC20.9■□□□□ 0.94
CPS1P31327 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPS1P31327 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPS1P31327 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CPS1P31327 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPS1P31327 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CPS1P31327 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CPS1P31327 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CPS1P31327 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC20.9■□□□□ 0.94
CPS1P31327 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC20.9■□□□□ 0.94
CPS1P31327 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC20.9■□□□□ 0.94
CPS1P31327 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CPS1P31327 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CPS1P31327 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CPS1P31327 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
CPS1P31327 SUMO4-201ENST00000326669 1066 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
CPS1P31327 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CPS1P31327 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CPS1P31327 XBP1P1-201ENST00000436573 652 ntBASIC20.89■□□□□ 0.94
CPS1P31327 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC20.89■□□□□ 0.94
CPS1P31327 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CPS1P31327 CISD2-202ENST00000503643 808 ntTSL 2 BASIC20.89■□□□□ 0.94
CPS1P31327 GCOM2-201ENST00000509133 1104 ntBASIC20.89■□□□□ 0.94
CPS1P31327 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
CPS1P31327 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
CPS1P31327 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CPS1P31327 AC007952.4-201ENST00000573866 637 ntBASIC20.89■□□□□ 0.94
CPS1P31327 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC20.89■□□□□ 0.94
CPS1P31327 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC20.89■□□□□ 0.94
CPS1P31327 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CPS1P31327 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC20.89■□□□□ 0.94
CPS1P31327 AC144522.1-201ENST00000625111 1658 ntBASIC20.89■□□□□ 0.94
CPS1P31327 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CPS1P31327 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CPS1P31327 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
CPS1P31327 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CPS1P31327 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC20.89■□□□□ 0.93
CPS1P31327 AC018629.1-201ENST00000623381 1736 ntBASIC20.89■□□□□ 0.93
CPS1P31327 HLA-DQB1-202ENST00000399079 1501 ntBASIC20.89■□□□□ 0.93
CPS1P31327 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CPS1P31327 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
CPS1P31327 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC20.89■□□□□ 0.93
CPS1P31327 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CPS1P31327 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPS1P31327 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPS1P31327 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC20.88■□□□□ 0.93
CPS1P31327 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CPS1P31327 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CPS1P31327 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPS1P31327 RPL35P9-201ENST00000446059 350 ntBASIC20.88■□□□□ 0.93
CPS1P31327 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPS1P31327 AP005264.6-204ENST00000588436 719 ntBASIC20.88■□□□□ 0.93
CPS1P31327 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPS1P31327 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.88■□□□□ 0.93
CPS1P31327 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC20.88■□□□□ 0.93
CPS1P31327 AC090616.6-203ENST00000579186 1945 ntBASIC20.88■□□□□ 0.93
CPS1P31327 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPS1P31327 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CPS1P31327 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CPS1P31327 CICP13-201ENST00000422015 2789 ntBASIC20.88■□□□□ 0.93
CPS1P31327 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC20.88■□□□□ 0.93
CPS1P31327 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC20.88■□□□□ 0.93
CPS1P31327 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPS1P31327 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPS1P31327 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CPS1P31327 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC20.88■□□□□ 0.93
CPS1P31327 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
CPS1P31327 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC20.88■□□□□ 0.93
CPS1P31327 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CPS1P31327 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CPS1P31327 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC20.88■□□□□ 0.93
CPS1P31327 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC20.88■□□□□ 0.93
CPS1P31327 ELP5-212ENST00000574255 671 ntTSL 2 BASIC20.88■□□□□ 0.93
CPS1P31327 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC20.88■□□□□ 0.93
CPS1P31327 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
CPS1P31327 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPS1P31327 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CPS1P31327 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC20.88■□□□□ 0.93
CPS1P31327 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC20.87■□□□□ 0.93
CPS1P31327 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPS1P31327 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPS1P31327 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CPS1P31327 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CPS1P31327 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPS1P31327 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC20.87■□□□□ 0.93
CPS1P31327 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPS1P31327 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPS1P31327 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC20.87■□□□□ 0.93
CPS1P31327 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPS1P31327 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPS1P31327 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CPS1P31327 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms