Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
GDF1P27539 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
GDF1P27539 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GDF1P27539 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.81□□□□□ -0.2
GDF1P27539 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GDF1P27539 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
GDF1P27539 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GDF1P27539 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.81□□□□□ -0.2
GDF1P27539 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GDF1P27539 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
GDF1P27539 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
GDF1P27539 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
GDF1P27539 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.81□□□□□ -0.2
GDF1P27539 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.81□□□□□ -0.2
GDF1P27539 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.81□□□□□ -0.2
GDF1P27539 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.81□□□□□ -0.2
GDF1P27539 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.81□□□□□ -0.2
GDF1P27539 AC026954.1-201ENST00000429771 1293 ntBASIC13.81□□□□□ -0.2
GDF1P27539 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
GDF1P27539 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.81□□□□□ -0.2
GDF1P27539 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
GDF1P27539 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
GDF1P27539 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GDF1P27539 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.81□□□□□ -0.2
GDF1P27539 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC13.81□□□□□ -0.2
GDF1P27539 AC023310.1-201ENST00000554836 735 ntBASIC13.81□□□□□ -0.2
GDF1P27539 RN7SL48P-201ENST00000579283 293 ntBASIC13.81□□□□□ -0.2
GDF1P27539 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.81□□□□□ -0.2
GDF1P27539 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.81□□□□□ -0.2
GDF1P27539 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.81□□□□□ -0.2
GDF1P27539 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GDF1P27539 REXO1L4P-201ENST00000605109 1937 ntBASIC13.81□□□□□ -0.2
GDF1P27539 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
GDF1P27539 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GDF1P27539 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.81□□□□□ -0.2
GDF1P27539 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
GDF1P27539 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GDF1P27539 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GDF1P27539 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
GDF1P27539 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
GDF1P27539 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GDF1P27539 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GDF1P27539 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GDF1P27539 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.81□□□□□ -0.2
GDF1P27539 AC055811.4-201ENST00000624039 1754 ntBASIC13.81□□□□□ -0.2
GDF1P27539 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
GDF1P27539 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
GDF1P27539 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDF1P27539 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GDF1P27539 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDF1P27539 AL354989.2-201ENST00000435838 1540 ntBASIC13.8□□□□□ -0.2
GDF1P27539 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GDF1P27539 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDF1P27539 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
GDF1P27539 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GDF1P27539 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.8□□□□□ -0.2
GDF1P27539 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDF1P27539 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDF1P27539 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDF1P27539 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.8□□□□□ -0.2
GDF1P27539 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GDF1P27539 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
GDF1P27539 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDF1P27539 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDF1P27539 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDF1P27539 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GDF1P27539 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.8□□□□□ -0.2
GDF1P27539 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDF1P27539 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDF1P27539 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC13.8□□□□□ -0.2
GDF1P27539 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDF1P27539 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.8□□□□□ -0.2
GDF1P27539 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GDF1P27539 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.8□□□□□ -0.2
GDF1P27539 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GDF1P27539 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.8□□□□□ -0.2
GDF1P27539 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GDF1P27539 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDF1P27539 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.8□□□□□ -0.2
GDF1P27539 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GDF1P27539 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.8□□□□□ -0.2
GDF1P27539 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
GDF1P27539 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GDF1P27539 ETV2-208ENST00000621247 941 ntTSL 5 BASIC13.8□□□□□ -0.2
GDF1P27539 ENPP7P14-201ENST00000621765 1040 ntBASIC13.8□□□□□ -0.2
GDF1P27539 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.8□□□□□ -0.2
GDF1P27539 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDF1P27539 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDF1P27539 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GDF1P27539 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDF1P27539 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
GDF1P27539 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GDF1P27539 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDF1P27539 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDF1P27539 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.8□□□□□ -0.2
GDF1P27539 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDF1P27539 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDF1P27539 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
GDF1P27539 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
GDF1P27539 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms