Protein–RNA interactions for Protein: P26441

CNTF, Ciliary neurotrophic factor, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFP26441 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNTFP26441 KCP-203ENST00000610776 5108 ntTSL 5 BASIC15.24■□□□□ 0.03
CNTFP26441 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNTFP26441 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNTFP26441 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CNTFP26441 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CNTFP26441 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CNTFP26441 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNTFP26441 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNTFP26441 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNTFP26441 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNTFP26441 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNTFP26441 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNTFP26441 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNTFP26441 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNTFP26441 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CNTFP26441 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNTFP26441 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.23■□□□□ 0.03
CNTFP26441 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNTFP26441 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.23■□□□□ 0.03
CNTFP26441 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNTFP26441 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNTFP26441 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNTFP26441 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNTFP26441 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNTFP26441 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNTFP26441 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CNTFP26441 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNTFP26441 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CNTFP26441 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.23■□□□□ 0.03
CNTFP26441 RAD18-204ENST00000418463 563 ntTSL 4 BASIC15.23■□□□□ 0.03
CNTFP26441 RAD18-205ENST00000421052 582 ntTSL 3 BASIC15.23■□□□□ 0.03
CNTFP26441 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CNTFP26441 AC069262.1-201ENST00000539058 672 ntBASIC15.23■□□□□ 0.03
CNTFP26441 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.23■□□□□ 0.03
CNTFP26441 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNTFP26441 TEX28P1-201ENST00000613479 1221 ntBASIC15.23■□□□□ 0.03
CNTFP26441 TEX28P2-201ENST00000617764 1221 ntBASIC15.23■□□□□ 0.03
CNTFP26441 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.23■□□□□ 0.03
CNTFP26441 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNTFP26441 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNTFP26441 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.23■□□□□ 0.03
CNTFP26441 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CNTFP26441 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNTFP26441 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNTFP26441 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNTFP26441 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CNTFP26441 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNTFP26441 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.23■□□□□ 0.03
CNTFP26441 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNTFP26441 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNTFP26441 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
CNTFP26441 AL359881.3-201ENST00000602640 1721 ntBASIC15.23■□□□□ 0.03
CNTFP26441 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNTFP26441 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CNTFP26441 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.22■□□□□ 0.03
CNTFP26441 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CNTFP26441 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CNTFP26441 AC041040.2-201ENST00000622926 2899 ntBASIC15.22■□□□□ 0.03
CNTFP26441 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNTFP26441 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
CNTFP26441 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNTFP26441 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNTFP26441 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
CNTFP26441 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.22■□□□□ 0.03
CNTFP26441 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNTFP26441 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.22■□□□□ 0.03
CNTFP26441 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.22■□□□□ 0.03
CNTFP26441 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CNTFP26441 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNTFP26441 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNTFP26441 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.22■□□□□ 0.03
CNTFP26441 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.22■□□□□ 0.03
CNTFP26441 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
CNTFP26441 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CNTFP26441 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC15.22■□□□□ 0.03
CNTFP26441 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.22■□□□□ 0.03
CNTFP26441 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
CNTFP26441 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNTFP26441 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.22■□□□□ 0.03
CNTFP26441 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.22■□□□□ 0.03
CNTFP26441 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNTFP26441 AC211486.1-202ENST00000416371 468 ntBASIC15.22■□□□□ 0.03
CNTFP26441 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.22■□□□□ 0.03
CNTFP26441 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.22■□□□□ 0.03
CNTFP26441 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.22■□□□□ 0.03
CNTFP26441 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC15.22■□□□□ 0.03
CNTFP26441 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.22■□□□□ 0.03
CNTFP26441 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.22■□□□□ 0.03
CNTFP26441 AC211476.1-201ENST00000503899 468 ntBASIC15.22■□□□□ 0.03
CNTFP26441 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.22■□□□□ 0.03
CNTFP26441 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CNTFP26441 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNTFP26441 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.22■□□□□ 0.03
CNTFP26441 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.22■□□□□ 0.03
CNTFP26441 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
CNTFP26441 AC134684.3-201ENST00000641758 218 ntBASIC15.22■□□□□ 0.03
CNTFP26441 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CNTFP26441 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CNTFP26441 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms