Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 REXO1L6P-202ENST00000619970 1078 ntBASIC12.97□□□□□ -0.33
VAMP1P23763 AC008735.5-201ENST00000623544 497 ntBASIC12.97□□□□□ -0.33
VAMP1P23763 AC066615.1-201ENST00000640911 628 ntBASIC12.97□□□□□ -0.33
VAMP1P23763 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP1P23763 CDY3P-201ENST00000454543 1618 ntBASIC12.97□□□□□ -0.33
VAMP1P23763 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP1P23763 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
VAMP1P23763 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP1P23763 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
VAMP1P23763 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
VAMP1P23763 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.97□□□□□ -0.33
VAMP1P23763 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP1P23763 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP1P23763 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP1P23763 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP1P23763 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
VAMP1P23763 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP1P23763 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.97□□□□□ -0.33
VAMP1P23763 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
VAMP1P23763 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC12.97□□□□□ -0.33
VAMP1P23763 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC12.97□□□□□ -0.33
VAMP1P23763 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.97□□□□□ -0.33
VAMP1P23763 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP1P23763 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
VAMP1P23763 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP1P23763 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP1P23763 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
VAMP1P23763 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
VAMP1P23763 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC12.96□□□□□ -0.33
VAMP1P23763 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
VAMP1P23763 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VAMP1P23763 AC152010.1-201ENST00000415779 2006 ntBASIC12.96□□□□□ -0.33
VAMP1P23763 AC097478.1-206ENST00000513572 2010 ntTSL 3 BASIC12.96□□□□□ -0.33
VAMP1P23763 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VAMP1P23763 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VAMP1P23763 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VAMP1P23763 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC12.96□□□□□ -0.33
VAMP1P23763 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.96□□□□□ -0.33
VAMP1P23763 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.96□□□□□ -0.33
VAMP1P23763 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.96□□□□□ -0.33
VAMP1P23763 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VAMP1P23763 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VAMP1P23763 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
VAMP1P23763 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
VAMP1P23763 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VAMP1P23763 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
VAMP1P23763 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VAMP1P23763 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
VAMP1P23763 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC12.96□□□□□ -0.33
VAMP1P23763 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
VAMP1P23763 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.96□□□□□ -0.33
VAMP1P23763 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
VAMP1P23763 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VAMP1P23763 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VAMP1P23763 DFFB-203ENST00000341385 572 ntTSL 5 BASIC12.96□□□□□ -0.33
VAMP1P23763 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
VAMP1P23763 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC12.96□□□□□ -0.33
VAMP1P23763 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
VAMP1P23763 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VAMP1P23763 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC12.96□□□□□ -0.33
VAMP1P23763 CCDC74BP1-201ENST00000508880 1123 ntBASIC12.96□□□□□ -0.33
VAMP1P23763 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC12.96□□□□□ -0.33
VAMP1P23763 AC105339.3-201ENST00000560043 636 ntBASIC12.96□□□□□ -0.33
VAMP1P23763 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC12.96□□□□□ -0.33
VAMP1P23763 AL049597.2-201ENST00000565575 961 ntBASIC12.96□□□□□ -0.33
VAMP1P23763 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC12.96□□□□□ -0.33
VAMP1P23763 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC12.96□□□□□ -0.33
VAMP1P23763 AC011467.4-201ENST00000594891 528 ntBASIC12.96□□□□□ -0.33
VAMP1P23763 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
VAMP1P23763 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
VAMP1P23763 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC12.96□□□□□ -0.33
VAMP1P23763 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
VAMP1P23763 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.34
VAMP1P23763 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.96□□□□□ -0.34
VAMP1P23763 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
VAMP1P23763 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
VAMP1P23763 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
VAMP1P23763 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
VAMP1P23763 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.96□□□□□ -0.34
VAMP1P23763 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
VAMP1P23763 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
VAMP1P23763 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
VAMP1P23763 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
VAMP1P23763 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC12.96□□□□□ -0.34
VAMP1P23763 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
VAMP1P23763 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
VAMP1P23763 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VAMP1P23763 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VAMP1P23763 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VAMP1P23763 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VAMP1P23763 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VAMP1P23763 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.95□□□□□ -0.34
VAMP1P23763 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VAMP1P23763 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VAMP1P23763 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
VAMP1P23763 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
VAMP1P23763 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VAMP1P23763 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.95□□□□□ -0.34
VAMP1P23763 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VAMP1P23763 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms