Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCL1P22362 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CCL1P22362 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCL1P22362 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.09□□□□□ -0.31
CCL1P22362 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CCL1P22362 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CCL1P22362 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.09□□□□□ -0.31
CCL1P22362 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC13.09□□□□□ -0.31
CCL1P22362 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.09□□□□□ -0.31
CCL1P22362 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.09□□□□□ -0.31
CCL1P22362 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.31
CCL1P22362 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
CCL1P22362 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CCL1P22362 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CCL1P22362 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
CCL1P22362 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
CCL1P22362 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CCL1P22362 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.31
CCL1P22362 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL1P22362 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL1P22362 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL1P22362 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CCL1P22362 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL1P22362 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL1P22362 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL1P22362 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL1P22362 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CCL1P22362 KRT8P14-201ENST00000414254 1442 ntBASIC13.08□□□□□ -0.32
CCL1P22362 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL1P22362 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL1P22362 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.08□□□□□ -0.32
CCL1P22362 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL1P22362 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL1P22362 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL1P22362 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL1P22362 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
CCL1P22362 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.08□□□□□ -0.32
CCL1P22362 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.08□□□□□ -0.32
CCL1P22362 AL139094.1-201ENST00000405549 1188 ntBASIC13.08□□□□□ -0.32
CCL1P22362 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.08□□□□□ -0.32
CCL1P22362 MRPS18AP1-201ENST00000414458 589 ntBASIC13.08□□□□□ -0.32
CCL1P22362 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL1P22362 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.08□□□□□ -0.32
CCL1P22362 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.08□□□□□ -0.32
CCL1P22362 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.08□□□□□ -0.32
CCL1P22362 DOC2GP-202ENST00000514950 1163 ntBASIC13.08□□□□□ -0.32
CCL1P22362 AC022447.6-201ENST00000515522 438 ntBASIC13.08□□□□□ -0.32
CCL1P22362 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.08□□□□□ -0.32
CCL1P22362 TPRX2P-201ENST00000535362 881 ntBASIC13.08□□□□□ -0.32
CCL1P22362 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.08□□□□□ -0.32
CCL1P22362 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.08□□□□□ -0.32
CCL1P22362 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.08□□□□□ -0.32
CCL1P22362 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.08□□□□□ -0.32
CCL1P22362 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.08□□□□□ -0.32
CCL1P22362 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.08□□□□□ -0.32
CCL1P22362 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
CCL1P22362 BX539320.1-201ENST00000623759 877 ntBASIC13.08□□□□□ -0.32
CCL1P22362 AL603764.1-201ENST00000636452 321 ntBASIC13.08□□□□□ -0.32
CCL1P22362 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCL1P22362 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCL1P22362 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
CCL1P22362 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL1P22362 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
CCL1P22362 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCL1P22362 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL1P22362 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCL1P22362 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CCL1P22362 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL1P22362 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CCL1P22362 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCL1P22362 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CCL1P22362 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL1P22362 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL1P22362 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.07□□□□□ -0.32
CCL1P22362 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
CCL1P22362 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL1P22362 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.07□□□□□ -0.32
CCL1P22362 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL1P22362 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL1P22362 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.07□□□□□ -0.32
CCL1P22362 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCL1P22362 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL1P22362 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.07□□□□□ -0.32
CCL1P22362 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL1P22362 AC136759.1-202ENST00000530858 2194 ntBASIC13.07□□□□□ -0.32
CCL1P22362 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL1P22362 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCL1P22362 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL1P22362 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL1P22362 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL1P22362 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL1P22362 AC152010.1-201ENST00000415779 2006 ntBASIC13.07□□□□□ -0.32
CCL1P22362 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.07□□□□□ -0.32
CCL1P22362 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.07□□□□□ -0.32
CCL1P22362 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.07□□□□□ -0.32
CCL1P22362 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL1P22362 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL1P22362 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CCL1P22362 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CCL1P22362 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms