Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
MSR1P21757 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MSR1P21757 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MSR1P21757 LINC02228-204ENST00000642115 2962 ntBASIC13.5□□□□□ -0.25
MSR1P21757 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MSR1P21757 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MSR1P21757 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MSR1P21757 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
MSR1P21757 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.5□□□□□ -0.25
MSR1P21757 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MSR1P21757 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
MSR1P21757 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
MSR1P21757 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.5□□□□□ -0.25
MSR1P21757 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
MSR1P21757 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MSR1P21757 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.5□□□□□ -0.25
MSR1P21757 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
MSR1P21757 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
MSR1P21757 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.5□□□□□ -0.25
MSR1P21757 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
MSR1P21757 SLC7A15P-201ENST00000424028 1363 ntBASIC13.5□□□□□ -0.25
MSR1P21757 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MSR1P21757 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MSR1P21757 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.5□□□□□ -0.25
MSR1P21757 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
MSR1P21757 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
MSR1P21757 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.5□□□□□ -0.25
MSR1P21757 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MSR1P21757 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.5□□□□□ -0.25
MSR1P21757 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MSR1P21757 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MSR1P21757 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MSR1P21757 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MSR1P21757 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
MSR1P21757 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.5□□□□□ -0.25
MSR1P21757 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MSR1P21757 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MSR1P21757 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
MSR1P21757 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.5□□□□□ -0.25
MSR1P21757 RAC2-204ENST00000406508 893 ntTSL 5 BASIC13.5□□□□□ -0.25
MSR1P21757 DFFBP1-201ENST00000433250 979 ntBASIC13.5□□□□□ -0.25
MSR1P21757 UGT1A2P-201ENST00000454886 866 ntBASIC13.5□□□□□ -0.25
MSR1P21757 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.5□□□□□ -0.25
MSR1P21757 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
MSR1P21757 VDAC1P7-201ENST00000462417 847 ntBASIC13.5□□□□□ -0.25
MSR1P21757 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC13.5□□□□□ -0.25
MSR1P21757 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.5□□□□□ -0.25
MSR1P21757 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.5□□□□□ -0.25
MSR1P21757 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.5□□□□□ -0.25
MSR1P21757 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MSR1P21757 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.5□□□□□ -0.25
MSR1P21757 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.5□□□□□ -0.25
MSR1P21757 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MSR1P21757 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
MSR1P21757 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
MSR1P21757 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
MSR1P21757 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
MSR1P21757 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
MSR1P21757 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.5□□□□□ -0.25
MSR1P21757 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
MSR1P21757 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MSR1P21757 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MSR1P21757 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
MSR1P21757 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MSR1P21757 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
MSR1P21757 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.5□□□□□ -0.25
MSR1P21757 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
MSR1P21757 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.49□□□□□ -0.25
MSR1P21757 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MSR1P21757 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
MSR1P21757 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MSR1P21757 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
MSR1P21757 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
MSR1P21757 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MSR1P21757 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MSR1P21757 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MSR1P21757 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MSR1P21757 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MSR1P21757 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
MSR1P21757 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MSR1P21757 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.49□□□□□ -0.25
MSR1P21757 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MSR1P21757 FGD5P1-202ENST00000614866 2498 ntBASIC13.49□□□□□ -0.25
MSR1P21757 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.49□□□□□ -0.25
MSR1P21757 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.49□□□□□ -0.25
MSR1P21757 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MSR1P21757 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
MSR1P21757 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MSR1P21757 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.49□□□□□ -0.25
MSR1P21757 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
MSR1P21757 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MSR1P21757 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
MSR1P21757 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
MSR1P21757 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MSR1P21757 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MSR1P21757 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.49□□□□□ -0.25
MSR1P21757 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MSR1P21757 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
MSR1P21757 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.49□□□□□ -0.25
MSR1P21757 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms