Protein–RNA interactions for Protein: P19474

TRIM21, E3 ubiquitin-protein ligase TRIM21, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM21P19474 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM21P19474 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
TRIM21P19474 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM21P19474 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM21P19474 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRIM21P19474 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM21P19474 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM21P19474 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM21P19474 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM21P19474 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM21P19474 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TRIM21P19474 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM21P19474 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.88■□□□□ 0.29
TRIM21P19474 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.88■□□□□ 0.29
TRIM21P19474 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM21P19474 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM21P19474 BCRP1-201ENST00000444246 691 ntBASIC16.88■□□□□ 0.29
TRIM21P19474 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC16.88■□□□□ 0.29
TRIM21P19474 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM21P19474 AL109936.8-201ENST00000641772 604 ntBASIC16.88■□□□□ 0.29
TRIM21P19474 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM21P19474 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.88■□□□□ 0.29
TRIM21P19474 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM21P19474 AP000845.1-201ENST00000581677 2131 ntBASIC16.88■□□□□ 0.29
TRIM21P19474 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM21P19474 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM21P19474 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM21P19474 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM21P19474 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM21P19474 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM21P19474 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
TRIM21P19474 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM21P19474 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM21P19474 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM21P19474 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM21P19474 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM21P19474 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM21P19474 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
TRIM21P19474 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM21P19474 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM21P19474 AC139749.1-202ENST00000617529 3139 ntBASIC16.87■□□□□ 0.29
TRIM21P19474 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM21P19474 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM21P19474 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM21P19474 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM21P19474 MEP1AP4-201ENST00000423244 1087 ntBASIC16.87■□□□□ 0.29
TRIM21P19474 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM21P19474 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRIM21P19474 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TRIM21P19474 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.87■□□□□ 0.29
TRIM21P19474 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM21P19474 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.87■□□□□ 0.29
TRIM21P19474 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.87■□□□□ 0.29
TRIM21P19474 AC044860.1-202ENST00000559481 777 ntBASIC16.87■□□□□ 0.29
TRIM21P19474 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.87■□□□□ 0.29
TRIM21P19474 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM21P19474 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM21P19474 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM21P19474 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM21P19474 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM21P19474 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM21P19474 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.87■□□□□ 0.29
TRIM21P19474 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM21P19474 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM21P19474 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM21P19474 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM21P19474 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TRIM21P19474 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM21P19474 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM21P19474 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM21P19474 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM21P19474 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM21P19474 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM21P19474 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
TRIM21P19474 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM21P19474 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
TRIM21P19474 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM21P19474 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM21P19474 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
TRIM21P19474 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
TRIM21P19474 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM21P19474 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM21P19474 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.86■□□□□ 0.29
TRIM21P19474 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM21P19474 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM21P19474 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.86■□□□□ 0.29
TRIM21P19474 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM21P19474 HMGN1P19-201ENST00000436976 333 ntBASIC16.86■□□□□ 0.29
TRIM21P19474 AC114501.2-201ENST00000439631 535 ntBASIC16.86■□□□□ 0.29
TRIM21P19474 TSPY16P-201ENST00000449843 468 ntBASIC16.86■□□□□ 0.29
TRIM21P19474 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM21P19474 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.86■□□□□ 0.29
TRIM21P19474 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM21P19474 AC015910.1-201ENST00000579400 975 ntBASIC16.86■□□□□ 0.29
TRIM21P19474 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.86■□□□□ 0.29
TRIM21P19474 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.86■□□□□ 0.29
TRIM21P19474 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM21P19474 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
TRIM21P19474 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
TRIM21P19474 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms