Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.21□□□□□ -0.13
PRKCAP17252 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.21□□□□□ -0.13
PRKCAP17252 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
PRKCAP17252 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.21□□□□□ -0.13
PRKCAP17252 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PRKCAP17252 AC138969.3-201ENST00000546612 1459 ntBASIC14.21□□□□□ -0.13
PRKCAP17252 AC138932.2-201ENST00000548268 1459 ntBASIC14.21□□□□□ -0.13
PRKCAP17252 AC126755.4-201ENST00000549796 1459 ntBASIC14.21□□□□□ -0.13
PRKCAP17252 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
PRKCAP17252 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
PRKCAP17252 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PRKCAP17252 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.21□□□□□ -0.13
PRKCAP17252 AL133267.1-201ENST00000398220 340 ntBASIC14.21□□□□□ -0.13
PRKCAP17252 RAC2-204ENST00000406508 893 ntTSL 5 BASIC14.21□□□□□ -0.13
PRKCAP17252 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PRKCAP17252 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.21□□□□□ -0.13
PRKCAP17252 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PRKCAP17252 BCRP1-201ENST00000444246 691 ntBASIC14.21□□□□□ -0.13
PRKCAP17252 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.21□□□□□ -0.13
PRKCAP17252 AL589987.1-201ENST00000453380 819 ntBASIC14.21□□□□□ -0.13
PRKCAP17252 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PRKCAP17252 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PRKCAP17252 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.21□□□□□ -0.13
PRKCAP17252 SPCS2P1-201ENST00000561636 679 ntBASIC14.21□□□□□ -0.13
PRKCAP17252 AC015910.1-201ENST00000579400 975 ntBASIC14.21□□□□□ -0.13
PRKCAP17252 AL096865.1-201ENST00000606796 927 ntBASIC14.21□□□□□ -0.13
PRKCAP17252 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.21□□□□□ -0.13
PRKCAP17252 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.21□□□□□ -0.13
PRKCAP17252 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.21□□□□□ -0.13
PRKCAP17252 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.21□□□□□ -0.13
PRKCAP17252 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PRKCAP17252 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PRKCAP17252 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
PRKCAP17252 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.21□□□□□ -0.13
PRKCAP17252 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.21□□□□□ -0.13
PRKCAP17252 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.21□□□□□ -0.14
PRKCAP17252 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.21□□□□□ -0.14
PRKCAP17252 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PRKCAP17252 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
PRKCAP17252 LINC01101-201ENST00000622953 1884 ntBASIC14.21□□□□□ -0.14
PRKCAP17252 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRKCAP17252 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRKCAP17252 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.2□□□□□ -0.14
PRKCAP17252 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRKCAP17252 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRKCAP17252 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRKCAP17252 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRKCAP17252 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
PRKCAP17252 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRKCAP17252 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRKCAP17252 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRKCAP17252 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.2□□□□□ -0.14
PRKCAP17252 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRKCAP17252 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRKCAP17252 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PRKCAP17252 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PRKCAP17252 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.2□□□□□ -0.14
PRKCAP17252 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
PRKCAP17252 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRKCAP17252 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PRKCAP17252 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.2□□□□□ -0.14
PRKCAP17252 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PRKCAP17252 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.2□□□□□ -0.14
PRKCAP17252 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRKCAP17252 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRKCAP17252 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRKCAP17252 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRKCAP17252 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PRKCAP17252 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRKCAP17252 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PRKCAP17252 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.2□□□□□ -0.14
PRKCAP17252 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PRKCAP17252 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.2□□□□□ -0.14
PRKCAP17252 KRT18P43-201ENST00000469825 1281 ntBASIC14.2□□□□□ -0.14
PRKCAP17252 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PRKCAP17252 MEIS3P1-201ENST00000495167 958 ntBASIC14.2□□□□□ -0.14
PRKCAP17252 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.2□□□□□ -0.14
PRKCAP17252 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.2□□□□□ -0.14
PRKCAP17252 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.2□□□□□ -0.14
PRKCAP17252 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.2□□□□□ -0.14
PRKCAP17252 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.2□□□□□ -0.14
PRKCAP17252 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.2□□□□□ -0.14
PRKCAP17252 AC004790.1-201ENST00000612686 536 ntBASIC14.2□□□□□ -0.14
PRKCAP17252 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRKCAP17252 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
PRKCAP17252 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PRKCAP17252 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRKCAP17252 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRKCAP17252 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.2□□□□□ -0.14
PRKCAP17252 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PRKCAP17252 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.2□□□□□ -0.14
PRKCAP17252 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PRKCAP17252 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PRKCAP17252 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PRKCAP17252 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
PRKCAP17252 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.2□□□□□ -0.14
PRKCAP17252 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PRKCAP17252 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRKCAP17252 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PRKCAP17252 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms