Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CFTRP13569 FAM90A21P-201ENST00000510875 1396 ntBASIC25.2■■□□□ 1.62
CFTRP13569 FAM90A15P-201ENST00000514465 1395 ntBASIC25.2■■□□□ 1.62
CFTRP13569 FAM90A6P-201ENST00000515148 1394 ntBASIC25.2■■□□□ 1.62
CFTRP13569 FAM90A16P-201ENST00000526662 1395 ntBASIC25.2■■□□□ 1.62
CFTRP13569 FAM90A9P-201ENST00000527940 1395 ntBASIC25.2■■□□□ 1.62
CFTRP13569 FAM90A5P-201ENST00000528738 1395 ntBASIC25.2■■□□□ 1.62
CFTRP13569 FAM90A14P-201ENST00000530386 1395 ntBASIC25.2■■□□□ 1.62
CFTRP13569 FAM90A13P-201ENST00000534703 1395 ntBASIC25.2■■□□□ 1.62
CFTRP13569 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CFTRP13569 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
CFTRP13569 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
CFTRP13569 RN7SL23P-201ENST00000484055 275 ntBASIC25.2■■□□□ 1.62
CFTRP13569 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC25.2■■□□□ 1.62
CFTRP13569 OR5BD1P-201ENST00000532527 817 ntBASIC25.2■■□□□ 1.62
CFTRP13569 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CFTRP13569 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC25.2■■□□□ 1.62
CFTRP13569 WT1-209ENST00000530998 2421 ntTSL 2 BASIC25.2■■□□□ 1.62
CFTRP13569 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CFTRP13569 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC25.2■■□□□ 1.62
CFTRP13569 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CFTRP13569 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC25.2■■□□□ 1.62
CFTRP13569 ZNF436-AS1-201ENST00000335648 2547 ntBASIC25.19■■□□□ 1.62
CFTRP13569 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC25.19■■□□□ 1.62
CFTRP13569 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CFTRP13569 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
CFTRP13569 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
CFTRP13569 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
CFTRP13569 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CFTRP13569 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CFTRP13569 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CFTRP13569 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
CFTRP13569 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CFTRP13569 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
CFTRP13569 PLS3-210ENST00000626746 216 ntTSL 4 BASIC25.19■■□□□ 1.62
CFTRP13569 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CFTRP13569 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
CFTRP13569 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC25.19■■□□□ 1.62
CFTRP13569 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC25.19■■□□□ 1.62
CFTRP13569 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC25.19■■□□□ 1.62
CFTRP13569 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CFTRP13569 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC25.18■■□□□ 1.62
CFTRP13569 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC25.18■■□□□ 1.62
CFTRP13569 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
CFTRP13569 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
CFTRP13569 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CFTRP13569 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
CFTRP13569 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
CFTRP13569 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC25.18■■□□□ 1.62
CFTRP13569 NME4-203ENST00000397722 1232 ntTSL 2 BASIC25.18■■□□□ 1.62
CFTRP13569 GAS5-209ENST00000430245 723 ntTSL 3 BASIC25.18■■□□□ 1.62
CFTRP13569 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC25.18■■□□□ 1.62
CFTRP13569 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC25.18■■□□□ 1.62
CFTRP13569 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
CFTRP13569 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC25.18■■□□□ 1.62
CFTRP13569 DKFZP434H168-201ENST00000567381 1905 ntBASIC25.18■■□□□ 1.62
CFTRP13569 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC25.18■■□□□ 1.62
CFTRP13569 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC25.18■■□□□ 1.62
CFTRP13569 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CFTRP13569 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CFTRP13569 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
CFTRP13569 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
CFTRP13569 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CFTRP13569 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CFTRP13569 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
CFTRP13569 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC25.17■■□□□ 1.62
CFTRP13569 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CFTRP13569 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC25.17■■□□□ 1.62
CFTRP13569 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CFTRP13569 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
CFTRP13569 IGHV1-12-201ENST00000518307 205 ntBASIC25.17■■□□□ 1.62
CFTRP13569 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC25.17■■□□□ 1.62
CFTRP13569 RPS5-204ENST00000598098 536 ntTSL 2 BASIC25.17■■□□□ 1.62
CFTRP13569 AL118522.1-201ENST00000611368 560 ntBASIC25.17■■□□□ 1.62
CFTRP13569 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC25.17■■□□□ 1.62
CFTRP13569 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
CFTRP13569 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CFTRP13569 LAIR1-209ENST00000434277 1645 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
CFTRP13569 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
CFTRP13569 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
CFTRP13569 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CFTRP13569 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC25.17■■□□□ 1.62
CFTRP13569 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CFTRP13569 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC25.17■■□□□ 1.62
CFTRP13569 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CFTRP13569 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
CFTRP13569 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC25.17■■□□□ 1.62
CFTRP13569 AC006372.4-201ENST00000624122 1543 ntBASIC25.16■■□□□ 1.62
CFTRP13569 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
CFTRP13569 SURF4-203ENST00000371991 715 ntTSL 3 BASIC25.16■■□□□ 1.62
CFTRP13569 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CFTRP13569 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
CFTRP13569 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC25.16■■□□□ 1.62
CFTRP13569 KRT18P46-201ENST00000435568 1279 ntBASIC25.16■■□□□ 1.62
CFTRP13569 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC25.16■■□□□ 1.62
CFTRP13569 GNG10P1-201ENST00000452289 199 ntBASIC25.16■■□□□ 1.62
CFTRP13569 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC25.16■■□□□ 1.62
CFTRP13569 OR2A1-AS1-210ENST00000496968 531 ntBASIC25.16■■□□□ 1.62
CFTRP13569 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC25.16■■□□□ 1.62
CFTRP13569 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC25.16■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms