Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
TOP2AP11388 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC25.84■■□□□ 1.73
TOP2AP11388 AP001184.1-201ENST00000637936 376 ntBASIC25.84■■□□□ 1.73
TOP2AP11388 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
TOP2AP11388 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
TOP2AP11388 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
TOP2AP11388 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
TOP2AP11388 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
TOP2AP11388 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
TOP2AP11388 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
TOP2AP11388 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC25.84■■□□□ 1.73
TOP2AP11388 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
TOP2AP11388 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
TOP2AP11388 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC25.83■■□□□ 1.73
TOP2AP11388 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC25.83■■□□□ 1.73
TOP2AP11388 AC092580.1-201ENST00000433998 658 ntBASIC25.83■■□□□ 1.73
TOP2AP11388 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
TOP2AP11388 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
TOP2AP11388 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC25.83■■□□□ 1.73
TOP2AP11388 MT3-203ENST00000565838 421 ntTSL 3 BASIC25.83■■□□□ 1.73
TOP2AP11388 AL132780.4-201ENST00000624870 1135 ntBASIC25.83■■□□□ 1.73
TOP2AP11388 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC25.83■■□□□ 1.73
TOP2AP11388 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC25.83■■□□□ 1.73
TOP2AP11388 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
TOP2AP11388 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
TOP2AP11388 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
TOP2AP11388 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
TOP2AP11388 API5-203ENST00000455725 2257 ntTSL 2 BASIC25.83■■□□□ 1.73
TOP2AP11388 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
TOP2AP11388 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
TOP2AP11388 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
TOP2AP11388 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC25.83■■□□□ 1.73
TOP2AP11388 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
TOP2AP11388 SSR4P1-203ENST00000599569 2260 ntBASIC25.83■■□□□ 1.73
TOP2AP11388 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
TOP2AP11388 AL592076.1-201ENST00000424448 303 ntBASIC25.83■■□□□ 1.72
TOP2AP11388 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
TOP2AP11388 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
TOP2AP11388 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC25.83■■□□□ 1.72
TOP2AP11388 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC25.83■■□□□ 1.72
TOP2AP11388 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC25.83■■□□□ 1.72
TOP2AP11388 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC25.83■■□□□ 1.72
TOP2AP11388 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC25.83■■□□□ 1.72
TOP2AP11388 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC25.83■■□□□ 1.72
TOP2AP11388 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
TOP2AP11388 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
TOP2AP11388 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
TOP2AP11388 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC25.82■■□□□ 1.72
TOP2AP11388 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
TOP2AP11388 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
TOP2AP11388 AC139712.1-201ENST00000378256 1875 ntBASIC25.82■■□□□ 1.72
TOP2AP11388 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
TOP2AP11388 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
TOP2AP11388 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
TOP2AP11388 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
TOP2AP11388 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC25.82■■□□□ 1.72
TOP2AP11388 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
TOP2AP11388 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC25.82■■□□□ 1.72
TOP2AP11388 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
TOP2AP11388 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
TOP2AP11388 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
TOP2AP11388 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC25.82■■□□□ 1.72
TOP2AP11388 AP000911.2-201ENST00000534330 502 ntBASIC25.82■■□□□ 1.72
TOP2AP11388 AC141586.1-203ENST00000567242 366 ntBASIC25.82■■□□□ 1.72
TOP2AP11388 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
TOP2AP11388 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC25.81■■□□□ 1.72
TOP2AP11388 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC25.81■■□□□ 1.72
TOP2AP11388 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC25.81■■□□□ 1.72
TOP2AP11388 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
TOP2AP11388 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC25.81■■□□□ 1.72
TOP2AP11388 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC25.81■■□□□ 1.72
TOP2AP11388 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC25.81■■□□□ 1.72
TOP2AP11388 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
TOP2AP11388 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC25.81■■□□□ 1.72
TOP2AP11388 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
TOP2AP11388 MIR645-201ENST00000385283 94 ntBASIC25.81■■□□□ 1.72
TOP2AP11388 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC25.81■■□□□ 1.72
TOP2AP11388 GUSBP10-201ENST00000417412 665 ntBASIC25.81■■□□□ 1.72
TOP2AP11388 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC25.81■■□□□ 1.72
TOP2AP11388 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC25.81■■□□□ 1.72
TOP2AP11388 CD164-210ENST00000512821 964 ntTSL 2 BASIC25.81■■□□□ 1.72
TOP2AP11388 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC25.81■■□□□ 1.72
TOP2AP11388 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
TOP2AP11388 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC25.81■■□□□ 1.72
TOP2AP11388 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
TOP2AP11388 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC25.81■■□□□ 1.72
TOP2AP11388 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC25.81■■□□□ 1.72
TOP2AP11388 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
TOP2AP11388 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC25.81■■□□□ 1.72
TOP2AP11388 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC25.81■■□□□ 1.72
TOP2AP11388 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
TOP2AP11388 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC25.8■■□□□ 1.72
TOP2AP11388 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC25.8■■□□□ 1.72
TOP2AP11388 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
TOP2AP11388 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
TOP2AP11388 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC25.8■■□□□ 1.72
TOP2AP11388 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
TOP2AP11388 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
TOP2AP11388 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC25.8■■□□□ 1.72
TOP2AP11388 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC25.8■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms