Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD28P10747 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC11.94□□□□□ -0.5
CD28P10747 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC11.94□□□□□ -0.5
CD28P10747 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CD28P10747 AC010491.1-201ENST00000563101 2797 ntBASIC11.94□□□□□ -0.5
CD28P10747 LINC00554-201ENST00000564841 3011 ntBASIC11.94□□□□□ -0.5
CD28P10747 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD28P10747 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD28P10747 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD28P10747 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD28P10747 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD28P10747 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD28P10747 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD28P10747 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
CD28P10747 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC11.94□□□□□ -0.5
CD28P10747 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CD28P10747 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
CD28P10747 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC11.94□□□□□ -0.5
CD28P10747 BCYRN1-201ENST00000418539 200 ntBASIC11.94□□□□□ -0.5
CD28P10747 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CD28P10747 NUS1P3-201ENST00000423502 862 ntBASIC11.94□□□□□ -0.5
CD28P10747 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
CD28P10747 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
CD28P10747 Z93015.1-201ENST00000451718 390 ntBASIC11.94□□□□□ -0.5
CD28P10747 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC11.94□□□□□ -0.5
CD28P10747 AC004066.1-201ENST00000502488 802 ntBASIC11.94□□□□□ -0.5
CD28P10747 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC11.94□□□□□ -0.5
CD28P10747 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
CD28P10747 EMC4-209ENST00000559421 497 ntTSL 2 BASIC11.94□□□□□ -0.5
CD28P10747 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC11.94□□□□□ -0.5
CD28P10747 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC11.94□□□□□ -0.5
CD28P10747 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC11.94□□□□□ -0.5
CD28P10747 AL603832.2-201ENST00000566195 2125 ntBASIC11.94□□□□□ -0.5
CD28P10747 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC11.94□□□□□ -0.5
CD28P10747 MIR3615-201ENST00000581999 87 ntBASIC11.94□□□□□ -0.5
CD28P10747 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC11.94□□□□□ -0.5
CD28P10747 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC11.94□□□□□ -0.5
CD28P10747 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC11.94□□□□□ -0.5
CD28P10747 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC11.94□□□□□ -0.5
CD28P10747 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC11.94□□□□□ -0.5
CD28P10747 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD28P10747 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD28P10747 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CD28P10747 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD28P10747 AL354989.2-201ENST00000435838 1540 ntBASIC11.94□□□□□ -0.5
CD28P10747 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD28P10747 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC11.94□□□□□ -0.5
CD28P10747 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
CD28P10747 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
CD28P10747 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC11.94□□□□□ -0.5
CD28P10747 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD28P10747 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD28P10747 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD28P10747 AC105917.1-201ENST00000506637 2539 ntBASIC11.94□□□□□ -0.5
CD28P10747 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD28P10747 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CD28P10747 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD28P10747 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD28P10747 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
CD28P10747 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CD28P10747 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD28P10747 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CD28P10747 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CD28P10747 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CD28P10747 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD28P10747 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
CD28P10747 AC127383.1-201ENST00000444697 1800 ntBASIC11.93□□□□□ -0.5
CD28P10747 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
CD28P10747 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CD28P10747 ACE-203ENST00000413513 2237 ntTSL 2 BASIC11.93□□□□□ -0.5
CD28P10747 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD28P10747 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD28P10747 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD28P10747 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD28P10747 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC11.93□□□□□ -0.5
CD28P10747 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
CD28P10747 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC11.93□□□□□ -0.5
CD28P10747 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC11.93□□□□□ -0.5
CD28P10747 GOLGA2P4-201ENST00000441462 777 ntBASIC11.93□□□□□ -0.5
CD28P10747 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC11.93□□□□□ -0.5
CD28P10747 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CD28P10747 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
CD28P10747 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC11.93□□□□□ -0.5
CD28P10747 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC11.93□□□□□ -0.5
CD28P10747 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC11.93□□□□□ -0.5
CD28P10747 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC11.93□□□□□ -0.5
CD28P10747 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC11.93□□□□□ -0.5
CD28P10747 AC103810.3-201ENST00000583567 96 ntBASIC11.93□□□□□ -0.5
CD28P10747 AL606495.2-201ENST00000605867 535 ntBASIC11.93□□□□□ -0.5
CD28P10747 AC006453.4-201ENST00000636949 1252 ntBASIC11.93□□□□□ -0.5
CD28P10747 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD28P10747 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC11.93□□□□□ -0.5
CD28P10747 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC11.93□□□□□ -0.5
CD28P10747 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD28P10747 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD28P10747 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC11.93□□□□□ -0.5
CD28P10747 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CD28P10747 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC11.93□□□□□ -0.5
CD28P10747 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
CD28P10747 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms