Protein–RNA interactions for Protein: P08922

ROS1, Proto-oncogene tyrosine-protein kinase ROS, humanhuman

Predictions only

Length 2,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ROS1P08922 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ROS1P08922 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ROS1P08922 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.14□□□□□ -0.31
ROS1P08922 AC018735.1-201ENST00000437208 1502 ntBASIC13.14□□□□□ -0.31
ROS1P08922 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
ROS1P08922 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ROS1P08922 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
ROS1P08922 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.14□□□□□ -0.31
ROS1P08922 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ROS1P08922 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ROS1P08922 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ROS1P08922 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.14□□□□□ -0.31
ROS1P08922 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ROS1P08922 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ROS1P08922 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ROS1P08922 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
ROS1P08922 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.14□□□□□ -0.31
ROS1P08922 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
ROS1P08922 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.14□□□□□ -0.31
ROS1P08922 HNRNPA1P32-201ENST00000396326 963 ntBASIC13.14□□□□□ -0.31
ROS1P08922 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
ROS1P08922 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ROS1P08922 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.14□□□□□ -0.31
ROS1P08922 REEP1-202ENST00000453231 940 ntTSL 2 BASIC13.14□□□□□ -0.31
ROS1P08922 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ROS1P08922 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
ROS1P08922 NEU3-202ENST00000526068 431 ntTSL 2 BASIC13.14□□□□□ -0.31
ROS1P08922 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.14□□□□□ -0.31
ROS1P08922 PPY2P-201ENST00000582808 702 ntBASIC13.14□□□□□ -0.31
ROS1P08922 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ROS1P08922 NDUFV2P1-201ENST00000596415 907 ntBASIC13.14□□□□□ -0.31
ROS1P08922 AP005019.2-201ENST00000615104 511 ntBASIC13.14□□□□□ -0.31
ROS1P08922 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.14□□□□□ -0.31
ROS1P08922 AC132938.4-201ENST00000623835 848 ntBASIC13.14□□□□□ -0.31
ROS1P08922 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
ROS1P08922 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ROS1P08922 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ROS1P08922 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ROS1P08922 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.14□□□□□ -0.31
ROS1P08922 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.14□□□□□ -0.31
ROS1P08922 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.14□□□□□ -0.31
ROS1P08922 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
ROS1P08922 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.14□□□□□ -0.31
ROS1P08922 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ROS1P08922 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ROS1P08922 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ROS1P08922 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
ROS1P08922 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ROS1P08922 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ROS1P08922 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ROS1P08922 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
ROS1P08922 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.14□□□□□ -0.31
ROS1P08922 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ROS1P08922 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC13.14□□□□□ -0.31
ROS1P08922 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
ROS1P08922 REXO1L2P-201ENST00000425429 2069 ntBASIC13.13□□□□□ -0.31
ROS1P08922 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ROS1P08922 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.13□□□□□ -0.31
ROS1P08922 AL157414.3-201ENST00000624276 1954 ntBASIC13.13□□□□□ -0.31
ROS1P08922 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.13□□□□□ -0.31
ROS1P08922 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ROS1P08922 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
ROS1P08922 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.13□□□□□ -0.31
ROS1P08922 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
ROS1P08922 RNA5SP423-201ENST00000517127 109 ntBASIC13.13□□□□□ -0.31
ROS1P08922 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.13□□□□□ -0.31
ROS1P08922 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ROS1P08922 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.13□□□□□ -0.31
ROS1P08922 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.13□□□□□ -0.31
ROS1P08922 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC13.13□□□□□ -0.31
ROS1P08922 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ROS1P08922 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.13□□□□□ -0.31
ROS1P08922 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ROS1P08922 AC127383.1-201ENST00000444697 1800 ntBASIC13.13□□□□□ -0.31
ROS1P08922 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.13□□□□□ -0.31
ROS1P08922 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.13□□□□□ -0.31
ROS1P08922 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ROS1P08922 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
ROS1P08922 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ROS1P08922 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
ROS1P08922 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
ROS1P08922 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ROS1P08922 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ROS1P08922 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.13□□□□□ -0.31
ROS1P08922 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ROS1P08922 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.13□□□□□ -0.31
ROS1P08922 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ROS1P08922 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
ROS1P08922 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.13□□□□□ -0.31
ROS1P08922 AC007787.1-201ENST00000588095 1583 ntBASIC13.13□□□□□ -0.31
ROS1P08922 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ROS1P08922 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ROS1P08922 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ROS1P08922 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ROS1P08922 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
ROS1P08922 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ROS1P08922 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ROS1P08922 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ROS1P08922 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ROS1P08922 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms