Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
CTSDP07339 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CTSDP07339 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
CTSDP07339 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CTSDP07339 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.7□□□□□ -0.38
CTSDP07339 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CTSDP07339 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC12.7□□□□□ -0.38
CTSDP07339 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CTSDP07339 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CTSDP07339 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CTSDP07339 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CTSDP07339 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.7□□□□□ -0.38
CTSDP07339 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CTSDP07339 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CTSDP07339 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CTSDP07339 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
CTSDP07339 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CTSDP07339 AL022342.1-201ENST00000400363 863 ntBASIC12.7□□□□□ -0.38
CTSDP07339 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC12.7□□□□□ -0.38
CTSDP07339 AL353705.2-201ENST00000428243 662 ntBASIC12.7□□□□□ -0.38
CTSDP07339 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
CTSDP07339 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC12.7□□□□□ -0.38
CTSDP07339 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.7□□□□□ -0.38
CTSDP07339 SPDYE11-202ENST00000450699 704 ntBASIC12.7□□□□□ -0.38
CTSDP07339 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC12.7□□□□□ -0.38
CTSDP07339 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC12.7□□□□□ -0.38
CTSDP07339 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.7□□□□□ -0.38
CTSDP07339 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC12.7□□□□□ -0.38
CTSDP07339 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC12.7□□□□□ -0.38
CTSDP07339 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CTSDP07339 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC12.7□□□□□ -0.38
CTSDP07339 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CTSDP07339 SPDYE9P-201ENST00000570642 692 ntBASIC12.7□□□□□ -0.38
CTSDP07339 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CTSDP07339 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC12.7□□□□□ -0.38
CTSDP07339 AC025181.2-201ENST00000606994 802 ntBASIC12.7□□□□□ -0.38
CTSDP07339 SPDYE10P-202ENST00000612005 668 ntBASIC12.7□□□□□ -0.38
CTSDP07339 SPDYE8P-202ENST00000612377 668 ntBASIC12.7□□□□□ -0.38
CTSDP07339 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.7□□□□□ -0.38
CTSDP07339 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CTSDP07339 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
CTSDP07339 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CTSDP07339 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CTSDP07339 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.7□□□□□ -0.38
CTSDP07339 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
CTSDP07339 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CTSDP07339 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.7□□□□□ -0.38
CTSDP07339 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CTSDP07339 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CTSDP07339 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
CTSDP07339 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CTSDP07339 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CTSDP07339 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC12.7□□□□□ -0.38
CTSDP07339 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CTSDP07339 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
CTSDP07339 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CTSDP07339 AL122018.1-201ENST00000446607 2310 ntBASIC12.7□□□□□ -0.38
CTSDP07339 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
CTSDP07339 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CTSDP07339 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CTSDP07339 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CTSDP07339 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC12.69□□□□□ -0.38
CTSDP07339 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CTSDP07339 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
CTSDP07339 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CTSDP07339 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CTSDP07339 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC12.69□□□□□ -0.38
CTSDP07339 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.69□□□□□ -0.38
CTSDP07339 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CTSDP07339 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.69□□□□□ -0.38
CTSDP07339 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CTSDP07339 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CTSDP07339 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
CTSDP07339 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CTSDP07339 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CTSDP07339 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CTSDP07339 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC12.69□□□□□ -0.38
CTSDP07339 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CTSDP07339 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CTSDP07339 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CTSDP07339 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
CTSDP07339 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CTSDP07339 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.69□□□□□ -0.38
CTSDP07339 MIR940-201ENST00000401276 94 ntBASIC12.69□□□□□ -0.38
CTSDP07339 LBH-204ENST00000406087 559 ntTSL 4 BASIC12.69□□□□□ -0.38
CTSDP07339 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC12.69□□□□□ -0.38
CTSDP07339 MED15P5-201ENST00000423150 992 ntBASIC12.69□□□□□ -0.38
CTSDP07339 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CTSDP07339 ADH5P3-201ENST00000433842 1137 ntBASIC12.69□□□□□ -0.38
CTSDP07339 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC12.69□□□□□ -0.38
CTSDP07339 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC12.69□□□□□ -0.38
CTSDP07339 AC022447.6-201ENST00000515522 438 ntBASIC12.69□□□□□ -0.38
CTSDP07339 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC12.69□□□□□ -0.38
CTSDP07339 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CTSDP07339 PIN1-206ENST00000587625 878 ntTSL 2 BASIC12.69□□□□□ -0.38
CTSDP07339 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.69□□□□□ -0.38
CTSDP07339 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CTSDP07339 AC027601.4-201ENST00000611259 610 ntBASIC12.69□□□□□ -0.38
CTSDP07339 AC026120.1-201ENST00000611536 926 ntBASIC12.69□□□□□ -0.38
CTSDP07339 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms