Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LCATP04180 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.39□□□□□ -0.27
LCATP04180 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
LCATP04180 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LCATP04180 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LCATP04180 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.39□□□□□ -0.27
LCATP04180 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.39□□□□□ -0.27
LCATP04180 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LCATP04180 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LCATP04180 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LCATP04180 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.39□□□□□ -0.27
LCATP04180 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LCATP04180 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
LCATP04180 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LCATP04180 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
LCATP04180 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
LCATP04180 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LCATP04180 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.39□□□□□ -0.27
LCATP04180 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LCATP04180 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LCATP04180 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LCATP04180 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LCATP04180 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.39□□□□□ -0.27
LCATP04180 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LCATP04180 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LCATP04180 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LCATP04180 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LCATP04180 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LCATP04180 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
LCATP04180 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LCATP04180 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LCATP04180 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LCATP04180 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
LCATP04180 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LCATP04180 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LCATP04180 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LCATP04180 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.38□□□□□ -0.27
LCATP04180 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LCATP04180 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
LCATP04180 CLK3P2-201ENST00000427566 1453 ntBASIC13.38□□□□□ -0.27
LCATP04180 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LCATP04180 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LCATP04180 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LCATP04180 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.38□□□□□ -0.27
LCATP04180 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LCATP04180 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LCATP04180 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LCATP04180 SPDYE19P-201ENST00000338590 713 ntBASIC13.38□□□□□ -0.27
LCATP04180 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.38□□□□□ -0.27
LCATP04180 MRPS18AP1-201ENST00000414458 589 ntBASIC13.38□□□□□ -0.27
LCATP04180 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.38□□□□□ -0.27
LCATP04180 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.38□□□□□ -0.27
LCATP04180 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.38□□□□□ -0.27
LCATP04180 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LCATP04180 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LCATP04180 RARRES2P5-201ENST00000564013 466 ntBASIC13.38□□□□□ -0.27
LCATP04180 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.38□□□□□ -0.27
LCATP04180 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.38□□□□□ -0.27
LCATP04180 AP000845.1-201ENST00000581677 2131 ntBASIC13.38□□□□□ -0.27
LCATP04180 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.38□□□□□ -0.27
LCATP04180 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LCATP04180 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LCATP04180 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LCATP04180 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LCATP04180 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
LCATP04180 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LCATP04180 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LCATP04180 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.38□□□□□ -0.27
LCATP04180 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
LCATP04180 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LCATP04180 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
LCATP04180 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LCATP04180 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
LCATP04180 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.38□□□□□ -0.27
LCATP04180 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
LCATP04180 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LCATP04180 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LCATP04180 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LCATP04180 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LCATP04180 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LCATP04180 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
LCATP04180 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LCATP04180 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LCATP04180 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LCATP04180 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.37□□□□□ -0.27
LCATP04180 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
LCATP04180 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.37□□□□□ -0.27
LCATP04180 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LCATP04180 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LCATP04180 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.37□□□□□ -0.27
LCATP04180 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LCATP04180 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.37□□□□□ -0.27
LCATP04180 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.37□□□□□ -0.27
LCATP04180 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LCATP04180 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LCATP04180 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LCATP04180 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LCATP04180 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LCATP04180 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LCATP04180 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms