Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNA1P02708 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.4■□□□□ 0.22
CHRNA1P02708 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
CHRNA1P02708 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNA1P02708 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.4■□□□□ 0.22
CHRNA1P02708 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNA1P02708 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHRNA1P02708 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
CHRNA1P02708 LILRP1-201ENST00000444199 1370 ntBASIC16.39■□□□□ 0.21
CHRNA1P02708 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHRNA1P02708 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHRNA1P02708 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHRNA1P02708 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.39■□□□□ 0.21
CHRNA1P02708 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.39■□□□□ 0.21
CHRNA1P02708 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHRNA1P02708 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHRNA1P02708 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHRNA1P02708 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CHRNA1P02708 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
CHRNA1P02708 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHRNA1P02708 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
CHRNA1P02708 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHRNA1P02708 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHRNA1P02708 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHRNA1P02708 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.39■□□□□ 0.21
CHRNA1P02708 SERF2-209ENST00000409646 559 ntTSL 4 BASIC16.39■□□□□ 0.21
CHRNA1P02708 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHRNA1P02708 PTPA-217ENST00000434095 870 ntTSL 2 BASIC16.39■□□□□ 0.21
CHRNA1P02708 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC16.39■□□□□ 0.21
CHRNA1P02708 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.39■□□□□ 0.21
CHRNA1P02708 AC125604.1-201ENST00000496255 707 ntBASIC16.39■□□□□ 0.21
CHRNA1P02708 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.39■□□□□ 0.21
CHRNA1P02708 SUPT4H1P2-201ENST00000501248 353 ntBASIC16.39■□□□□ 0.21
CHRNA1P02708 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC16.39■□□□□ 0.21
CHRNA1P02708 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC16.39■□□□□ 0.21
CHRNA1P02708 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC16.39■□□□□ 0.21
CHRNA1P02708 AL133499.1-201ENST00000596207 608 ntBASIC16.39■□□□□ 0.21
CHRNA1P02708 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CHRNA1P02708 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CHRNA1P02708 AC079336.7-201ENST00000623428 1078 ntBASIC16.39■□□□□ 0.21
CHRNA1P02708 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.39■□□□□ 0.21
CHRNA1P02708 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CHRNA1P02708 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHRNA1P02708 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.39■□□□□ 0.21
CHRNA1P02708 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHRNA1P02708 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.39■□□□□ 0.21
CHRNA1P02708 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHRNA1P02708 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.39■□□□□ 0.21
CHRNA1P02708 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHRNA1P02708 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
CHRNA1P02708 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CHRNA1P02708 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHRNA1P02708 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.38■□□□□ 0.21
CHRNA1P02708 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHRNA1P02708 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHRNA1P02708 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHRNA1P02708 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHRNA1P02708 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHRNA1P02708 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.38■□□□□ 0.21
CHRNA1P02708 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHRNA1P02708 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.38■□□□□ 0.21
CHRNA1P02708 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHRNA1P02708 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHRNA1P02708 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHRNA1P02708 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHRNA1P02708 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CHRNA1P02708 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC16.38■□□□□ 0.21
CHRNA1P02708 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHRNA1P02708 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.38■□□□□ 0.21
CHRNA1P02708 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.38■□□□□ 0.21
CHRNA1P02708 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.38■□□□□ 0.21
CHRNA1P02708 AL161670.2-201ENST00000557650 1227 ntBASIC16.38■□□□□ 0.21
CHRNA1P02708 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.38■□□□□ 0.21
CHRNA1P02708 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.38■□□□□ 0.21
CHRNA1P02708 MIR3907-201ENST00000579424 151 ntBASIC16.38■□□□□ 0.21
CHRNA1P02708 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHRNA1P02708 AC132192.2-201ENST00000596206 1147 ntBASIC16.38■□□□□ 0.21
CHRNA1P02708 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHRNA1P02708 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC16.38■□□□□ 0.21
CHRNA1P02708 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.38■□□□□ 0.21
CHRNA1P02708 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHRNA1P02708 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHRNA1P02708 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHRNA1P02708 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHRNA1P02708 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHRNA1P02708 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.38■□□□□ 0.21
CHRNA1P02708 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CHRNA1P02708 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.38■□□□□ 0.21
CHRNA1P02708 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CHRNA1P02708 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.38■□□□□ 0.21
CHRNA1P02708 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CHRNA1P02708 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHRNA1P02708 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC16.37■□□□□ 0.21
CHRNA1P02708 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CHRNA1P02708 AC087481.3-201ENST00000602886 1894 ntBASIC16.37■□□□□ 0.21
CHRNA1P02708 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CHRNA1P02708 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CHRNA1P02708 AC244394.1-201ENST00000435000 1665 ntBASIC16.37■□□□□ 0.21
CHRNA1P02708 AC003102.2-201ENST00000589195 1469 ntBASIC16.37■□□□□ 0.21
CHRNA1P02708 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms