Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.83□□□□□ -0.03
KRT6AP02538 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
KRT6AP02538 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KRT6AP02538 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
KRT6AP02538 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KRT6AP02538 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KRT6AP02538 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
KRT6AP02538 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KRT6AP02538 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.83□□□□□ -0.04
KRT6AP02538 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KRT6AP02538 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
KRT6AP02538 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
KRT6AP02538 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KRT6AP02538 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KRT6AP02538 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.83□□□□□ -0.04
KRT6AP02538 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.83□□□□□ -0.04
KRT6AP02538 SAMD11P1-201ENST00000571429 661 ntBASIC14.83□□□□□ -0.04
KRT6AP02538 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.83□□□□□ -0.04
KRT6AP02538 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.83□□□□□ -0.04
KRT6AP02538 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KRT6AP02538 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
KRT6AP02538 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KRT6AP02538 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
KRT6AP02538 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
KRT6AP02538 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KRT6AP02538 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.83□□□□□ -0.04
KRT6AP02538 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
KRT6AP02538 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
KRT6AP02538 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC14.83□□□□□ -0.04
KRT6AP02538 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
KRT6AP02538 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
KRT6AP02538 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
KRT6AP02538 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.83□□□□□ -0.04
KRT6AP02538 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6AP02538 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
KRT6AP02538 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6AP02538 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6AP02538 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6AP02538 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6AP02538 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.82□□□□□ -0.04
KRT6AP02538 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6AP02538 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6AP02538 AC007787.1-201ENST00000588095 1583 ntBASIC14.82□□□□□ -0.04
KRT6AP02538 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6AP02538 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6AP02538 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.82□□□□□ -0.04
KRT6AP02538 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.82□□□□□ -0.04
KRT6AP02538 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.82□□□□□ -0.04
KRT6AP02538 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6AP02538 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
KRT6AP02538 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6AP02538 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6AP02538 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6AP02538 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.82□□□□□ -0.04
KRT6AP02538 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.82□□□□□ -0.04
KRT6AP02538 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.82□□□□□ -0.04
KRT6AP02538 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.82□□□□□ -0.04
KRT6AP02538 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6AP02538 MEIS3P1-201ENST00000495167 958 ntBASIC14.82□□□□□ -0.04
KRT6AP02538 AC004066.1-201ENST00000502488 802 ntBASIC14.82□□□□□ -0.04
KRT6AP02538 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.82□□□□□ -0.04
KRT6AP02538 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.82□□□□□ -0.04
KRT6AP02538 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6AP02538 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.82□□□□□ -0.04
KRT6AP02538 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.82□□□□□ -0.04
KRT6AP02538 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
KRT6AP02538 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.82□□□□□ -0.04
KRT6AP02538 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.82□□□□□ -0.04
KRT6AP02538 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
KRT6AP02538 AC023511.2-201ENST00000618803 211 ntBASIC14.82□□□□□ -0.04
KRT6AP02538 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.82□□□□□ -0.04
KRT6AP02538 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.82□□□□□ -0.04
KRT6AP02538 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6AP02538 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6AP02538 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6AP02538 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6AP02538 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6AP02538 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6AP02538 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6AP02538 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.82□□□□□ -0.04
KRT6AP02538 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6AP02538 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6AP02538 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6AP02538 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.82□□□□□ -0.04
KRT6AP02538 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6AP02538 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
KRT6AP02538 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
KRT6AP02538 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.81□□□□□ -0.04
KRT6AP02538 AL359183.1-201ENST00000623796 2132 ntBASIC14.81□□□□□ -0.04
KRT6AP02538 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6AP02538 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6AP02538 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6AP02538 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.81□□□□□ -0.04
KRT6AP02538 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.81□□□□□ -0.04
KRT6AP02538 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6AP02538 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6AP02538 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6AP02538 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
KRT6AP02538 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
KRT6AP02538 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms