Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.17□□□□□ -0.3
HLA-DQB1P01920 PP14571-201ENST00000404327 934 ntTSL 2 BASIC13.17□□□□□ -0.3
HLA-DQB1P01920 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.17□□□□□ -0.3
HLA-DQB1P01920 AL450487.1-201ENST00000426799 995 ntBASIC13.17□□□□□ -0.3
HLA-DQB1P01920 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.17□□□□□ -0.3
HLA-DQB1P01920 AC074386.1-202ENST00000463561 864 ntBASIC13.17□□□□□ -0.3
HLA-DQB1P01920 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC13.17□□□□□ -0.3
HLA-DQB1P01920 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.17□□□□□ -0.3
HLA-DQB1P01920 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.17□□□□□ -0.3
HLA-DQB1P01920 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
HLA-DQB1P01920 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
HLA-DQB1P01920 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.17□□□□□ -0.3
HLA-DQB1P01920 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.17□□□□□ -0.3
HLA-DQB1P01920 AC145285.3-201ENST00000564603 959 ntBASIC13.17□□□□□ -0.3
HLA-DQB1P01920 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.17□□□□□ -0.3
HLA-DQB1P01920 AC018845.2-201ENST00000568326 409 ntBASIC13.17□□□□□ -0.3
HLA-DQB1P01920 AP002472.1-201ENST00000577490 586 ntBASIC13.17□□□□□ -0.3
HLA-DQB1P01920 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.17□□□□□ -0.3
HLA-DQB1P01920 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQB1P01920 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
HLA-DQB1P01920 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQB1P01920 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQB1P01920 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQB1P01920 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQB1P01920 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQB1P01920 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQB1P01920 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQB1P01920 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
HLA-DQB1P01920 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQB1P01920 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQB1P01920 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQB1P01920 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQB1P01920 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQB1P01920 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQB1P01920 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
HLA-DQB1P01920 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQB1P01920 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
HLA-DQB1P01920 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 AGGF1P1-201ENST00000509500 2073 ntBASIC13.16□□□□□ -0.3
HLA-DQB1P01920 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 KRT18P2-201ENST00000447938 1258 ntBASIC13.16□□□□□ -0.3
HLA-DQB1P01920 AC112191.1-201ENST00000523689 701 ntBASIC13.16□□□□□ -0.3
HLA-DQB1P01920 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 PDPK2P-202ENST00000562415 1191 ntBASIC13.16□□□□□ -0.3
HLA-DQB1P01920 AC034105.1-201ENST00000563488 319 ntBASIC13.16□□□□□ -0.3
HLA-DQB1P01920 SLC25A6P4-201ENST00000586535 553 ntBASIC13.16□□□□□ -0.3
HLA-DQB1P01920 AC027307.2-201ENST00000591252 911 ntBASIC13.16□□□□□ -0.3
HLA-DQB1P01920 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 AC020910.6-201ENST00000623084 1459 ntBASIC13.16□□□□□ -0.3
HLA-DQB1P01920 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
HLA-DQB1P01920 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DQB1P01920 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DQB1P01920 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DQB1P01920 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DQB1P01920 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
HLA-DQB1P01920 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms