Protein–RNA interactions for Protein: P01850

TRBC1, T-cell receptor beta-1 chain C region, humanhuman

Predictions only

Length 177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBC1P01850 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRBC1P01850 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBC1P01850 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBC1P01850 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBC1P01850 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBC1P01850 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
TRBC1P01850 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.25■□□□□ 0.03
TRBC1P01850 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.25■□□□□ 0.03
TRBC1P01850 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.25■□□□□ 0.03
TRBC1P01850 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC15.25■□□□□ 0.03
TRBC1P01850 AC239800.4-201ENST00000603712 296 ntBASIC15.25■□□□□ 0.03
TRBC1P01850 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.25■□□□□ 0.03
TRBC1P01850 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRBC1P01850 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TRBC1P01850 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.25■□□□□ 0.03
TRBC1P01850 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRBC1P01850 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.25■□□□□ 0.03
TRBC1P01850 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TRBC1P01850 ACE3P-201ENST00000423435 1973 ntBASIC15.25■□□□□ 0.03
TRBC1P01850 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRBC1P01850 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.25■□□□□ 0.03
TRBC1P01850 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.25■□□□□ 0.03
TRBC1P01850 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBC1P01850 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBC1P01850 AL138709.1-201ENST00000614840 1693 ntBASIC15.25■□□□□ 0.03
TRBC1P01850 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRBC1P01850 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.25■□□□□ 0.03
TRBC1P01850 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.25■□□□□ 0.03
TRBC1P01850 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRBC1P01850 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBC1P01850 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRBC1P01850 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRBC1P01850 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBC1P01850 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBC1P01850 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBC1P01850 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBC1P01850 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRBC1P01850 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBC1P01850 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBC1P01850 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBC1P01850 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.24■□□□□ 0.03
TRBC1P01850 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBC1P01850 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBC1P01850 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBC1P01850 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBC1P01850 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
TRBC1P01850 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBC1P01850 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBC1P01850 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.24■□□□□ 0.03
TRBC1P01850 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TRBC1P01850 KRT43P-201ENST00000434019 910 ntBASIC15.24■□□□□ 0.03
TRBC1P01850 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBC1P01850 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC15.24■□□□□ 0.03
TRBC1P01850 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.24■□□□□ 0.03
TRBC1P01850 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBC1P01850 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBC1P01850 KRT17P8-201ENST00000540749 863 ntBASIC15.24■□□□□ 0.03
TRBC1P01850 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.24■□□□□ 0.03
TRBC1P01850 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TRBC1P01850 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBC1P01850 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBC1P01850 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRBC1P01850 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRBC1P01850 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBC1P01850 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.24■□□□□ 0.03
TRBC1P01850 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBC1P01850 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
TRBC1P01850 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBC1P01850 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TRBC1P01850 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TRBC1P01850 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRBC1P01850 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRBC1P01850 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.24■□□□□ 0.03
TRBC1P01850 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.24■□□□□ 0.03
TRBC1P01850 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBC1P01850 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRBC1P01850 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRBC1P01850 AC055811.4-201ENST00000624039 1754 ntBASIC15.24■□□□□ 0.03
TRBC1P01850 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TRBC1P01850 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBC1P01850 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBC1P01850 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.23■□□□□ 0.03
TRBC1P01850 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRBC1P01850 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
TRBC1P01850 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.23■□□□□ 0.03
TRBC1P01850 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBC1P01850 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
TRBC1P01850 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
TRBC1P01850 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.23■□□□□ 0.03
TRBC1P01850 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBC1P01850 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRBC1P01850 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.23■□□□□ 0.03
TRBC1P01850 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.23■□□□□ 0.03
TRBC1P01850 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBC1P01850 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.23■□□□□ 0.03
TRBC1P01850 AC011270.2-201ENST00000624293 2550 ntBASIC15.23■□□□□ 0.03
TRBC1P01850 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBC1P01850 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.23■□□□□ 0.03
TRBC1P01850 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRBC1P01850 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms