Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLSTN1O94985 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.98■□□□□ 0.31
CLSTN1O94985 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.98■□□□□ 0.31
CLSTN1O94985 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.98■□□□□ 0.31
CLSTN1O94985 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.98■□□□□ 0.31
CLSTN1O94985 AJ011932.1-201ENST00000621707 465 ntBASIC16.98■□□□□ 0.31
CLSTN1O94985 AC004461.2-201ENST00000629517 803 ntBASIC16.98■□□□□ 0.31
CLSTN1O94985 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.98■□□□□ 0.31
CLSTN1O94985 AF228730.6-201ENST00000641497 218 ntBASIC16.98■□□□□ 0.31
CLSTN1O94985 AC084121.3-201ENST00000641716 218 ntBASIC16.98■□□□□ 0.31
CLSTN1O94985 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CLSTN1O94985 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.98■□□□□ 0.31
CLSTN1O94985 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CLSTN1O94985 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC16.98■□□□□ 0.31
CLSTN1O94985 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.98■□□□□ 0.31
CLSTN1O94985 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.98■□□□□ 0.31
CLSTN1O94985 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLSTN1O94985 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLSTN1O94985 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLSTN1O94985 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLSTN1O94985 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLSTN1O94985 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLSTN1O94985 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLSTN1O94985 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLSTN1O94985 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CLSTN1O94985 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.98■□□□□ 0.31
CLSTN1O94985 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CLSTN1O94985 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLSTN1O94985 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLSTN1O94985 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLSTN1O94985 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLSTN1O94985 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLSTN1O94985 USP47-202ENST00000339865 7775 ntTSL 2 BASIC16.97■□□□□ 0.31
CLSTN1O94985 AC136621.1-201ENST00000624017 2304 ntBASIC16.97■□□□□ 0.31
CLSTN1O94985 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLSTN1O94985 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLSTN1O94985 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLSTN1O94985 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLSTN1O94985 STRCP1-201ENST00000509801 5328 ntBASIC16.97■□□□□ 0.31
CLSTN1O94985 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLSTN1O94985 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLSTN1O94985 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.97■□□□□ 0.31
CLSTN1O94985 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CLSTN1O94985 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLSTN1O94985 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLSTN1O94985 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLSTN1O94985 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLSTN1O94985 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLSTN1O94985 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.97■□□□□ 0.31
CLSTN1O94985 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.97■□□□□ 0.31
CLSTN1O94985 HMGN1P19-201ENST00000436976 333 ntBASIC16.97■□□□□ 0.31
CLSTN1O94985 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.97■□□□□ 0.31
CLSTN1O94985 BCRP1-201ENST00000444246 691 ntBASIC16.97■□□□□ 0.31
CLSTN1O94985 UGT1A2P-201ENST00000454886 866 ntBASIC16.97■□□□□ 0.31
CLSTN1O94985 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.97■□□□□ 0.31
CLSTN1O94985 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLSTN1O94985 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC16.97■□□□□ 0.31
CLSTN1O94985 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.97■□□□□ 0.31
CLSTN1O94985 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.97■□□□□ 0.31
CLSTN1O94985 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.97■□□□□ 0.31
CLSTN1O94985 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CLSTN1O94985 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
CLSTN1O94985 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.97■□□□□ 0.31
CLSTN1O94985 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLSTN1O94985 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLSTN1O94985 AC127383.1-201ENST00000444697 1800 ntBASIC16.97■□□□□ 0.31
CLSTN1O94985 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLSTN1O94985 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLSTN1O94985 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.97■□□□□ 0.31
CLSTN1O94985 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLSTN1O94985 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLSTN1O94985 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLSTN1O94985 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CLSTN1O94985 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLSTN1O94985 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLSTN1O94985 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLSTN1O94985 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CLSTN1O94985 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CLSTN1O94985 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CLSTN1O94985 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLSTN1O94985 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLSTN1O94985 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLSTN1O94985 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CLSTN1O94985 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLSTN1O94985 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CLSTN1O94985 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLSTN1O94985 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLSTN1O94985 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
CLSTN1O94985 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLSTN1O94985 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
CLSTN1O94985 AC087386.2-201ENST00000623212 4637 ntBASIC16.96■□□□□ 0.31
CLSTN1O94985 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLSTN1O94985 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLSTN1O94985 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CLSTN1O94985 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
CLSTN1O94985 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CLSTN1O94985 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CLSTN1O94985 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.96■□□□□ 0.31
CLSTN1O94985 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CLSTN1O94985 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms