Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GPC4O75487 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GPC4O75487 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GPC4O75487 AL133267.1-201ENST00000398220 340 ntBASIC15.36■□□□□ 0.05
GPC4O75487 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.36■□□□□ 0.05
GPC4O75487 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
GPC4O75487 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.36■□□□□ 0.05
GPC4O75487 BCRP1-201ENST00000444246 691 ntBASIC15.36■□□□□ 0.05
GPC4O75487 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.36■□□□□ 0.05
GPC4O75487 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.36■□□□□ 0.05
GPC4O75487 MEIS3P1-201ENST00000495167 958 ntBASIC15.36■□□□□ 0.05
GPC4O75487 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
GPC4O75487 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.36■□□□□ 0.05
GPC4O75487 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.36■□□□□ 0.05
GPC4O75487 AL391069.4-201ENST00000609583 481 ntBASIC15.36■□□□□ 0.05
GPC4O75487 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
GPC4O75487 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GPC4O75487 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC15.36■□□□□ 0.05
GPC4O75487 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
GPC4O75487 CTBP1-AS2-206ENST00000581398 5652 ntBASIC15.36■□□□□ 0.05
GPC4O75487 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
GPC4O75487 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
GPC4O75487 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GPC4O75487 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.36■□□□□ 0.05
GPC4O75487 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GPC4O75487 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.36■□□□□ 0.05
GPC4O75487 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
GPC4O75487 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
GPC4O75487 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
GPC4O75487 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
GPC4O75487 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GPC4O75487 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
GPC4O75487 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
GPC4O75487 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
GPC4O75487 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
GPC4O75487 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
GPC4O75487 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
GPC4O75487 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC15.35■□□□□ 0.05
GPC4O75487 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
GPC4O75487 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.35■□□□□ 0.05
GPC4O75487 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GPC4O75487 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GPC4O75487 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.35■□□□□ 0.05
GPC4O75487 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
GPC4O75487 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GPC4O75487 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GPC4O75487 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
GPC4O75487 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GPC4O75487 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
GPC4O75487 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.35■□□□□ 0.05
GPC4O75487 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.35■□□□□ 0.05
GPC4O75487 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
GPC4O75487 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
GPC4O75487 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.35■□□□□ 0.05
GPC4O75487 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
GPC4O75487 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.35■□□□□ 0.05
GPC4O75487 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.35■□□□□ 0.05
GPC4O75487 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
GPC4O75487 AC104794.3-201ENST00000566840 1248 ntBASIC15.35■□□□□ 0.05
GPC4O75487 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.35■□□□□ 0.05
GPC4O75487 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
GPC4O75487 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GPC4O75487 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GPC4O75487 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
GPC4O75487 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
GPC4O75487 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.35■□□□□ 0.05
GPC4O75487 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GPC4O75487 AC023908.3-201ENST00000564211 3047 ntBASIC15.35■□□□□ 0.05
GPC4O75487 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GPC4O75487 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
GPC4O75487 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.35■□□□□ 0.05
GPC4O75487 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
GPC4O75487 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
GPC4O75487 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
GPC4O75487 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GPC4O75487 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
GPC4O75487 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GPC4O75487 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
GPC4O75487 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.34■□□□□ 0.05
GPC4O75487 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
GPC4O75487 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.34■□□□□ 0.05
GPC4O75487 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GPC4O75487 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
GPC4O75487 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GPC4O75487 AL121723.1-201ENST00000445194 1519 ntBASIC15.34■□□□□ 0.05
GPC4O75487 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GPC4O75487 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
GPC4O75487 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GPC4O75487 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
GPC4O75487 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GPC4O75487 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
GPC4O75487 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.34■□□□□ 0.05
GPC4O75487 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC15.34■□□□□ 0.05
GPC4O75487 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GPC4O75487 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
GPC4O75487 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.34■□□□□ 0.05
GPC4O75487 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.34■□□□□ 0.05
GPC4O75487 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.34■□□□□ 0.05
GPC4O75487 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
GPC4O75487 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms