Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
XRCC2O43543 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
XRCC2O43543 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
XRCC2O43543 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
XRCC2O43543 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.31□□□□□ -0.28
XRCC2O43543 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
XRCC2O43543 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
XRCC2O43543 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
XRCC2O43543 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
XRCC2O43543 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
XRCC2O43543 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
XRCC2O43543 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.3□□□□□ -0.28
XRCC2O43543 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
XRCC2O43543 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
XRCC2O43543 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
XRCC2O43543 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
XRCC2O43543 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
XRCC2O43543 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
XRCC2O43543 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
XRCC2O43543 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.3□□□□□ -0.28
XRCC2O43543 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
XRCC2O43543 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
XRCC2O43543 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
XRCC2O43543 GGCT-205ENST00000409436 954 ntTSL 3 BASIC13.3□□□□□ -0.28
XRCC2O43543 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.3□□□□□ -0.28
XRCC2O43543 AL589987.1-201ENST00000453380 819 ntBASIC13.3□□□□□ -0.28
XRCC2O43543 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
XRCC2O43543 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.3□□□□□ -0.28
XRCC2O43543 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
XRCC2O43543 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.3□□□□□ -0.28
XRCC2O43543 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.3□□□□□ -0.28
XRCC2O43543 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
XRCC2O43543 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.3□□□□□ -0.28
XRCC2O43543 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.3□□□□□ -0.28
XRCC2O43543 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.3□□□□□ -0.28
XRCC2O43543 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.3□□□□□ -0.28
XRCC2O43543 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
XRCC2O43543 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.3□□□□□ -0.28
XRCC2O43543 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.3□□□□□ -0.28
XRCC2O43543 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
XRCC2O43543 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
XRCC2O43543 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
XRCC2O43543 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.3□□□□□ -0.28
XRCC2O43543 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
XRCC2O43543 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
XRCC2O43543 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
XRCC2O43543 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
XRCC2O43543 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
XRCC2O43543 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
XRCC2O43543 AL359258.3-201ENST00000622910 2331 ntBASIC13.3□□□□□ -0.28
XRCC2O43543 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
XRCC2O43543 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
XRCC2O43543 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
XRCC2O43543 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
XRCC2O43543 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.3□□□□□ -0.28
XRCC2O43543 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
XRCC2O43543 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
XRCC2O43543 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
XRCC2O43543 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
XRCC2O43543 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
XRCC2O43543 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
XRCC2O43543 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
XRCC2O43543 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
XRCC2O43543 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
XRCC2O43543 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
XRCC2O43543 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
XRCC2O43543 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
XRCC2O43543 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
XRCC2O43543 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
XRCC2O43543 CLK3P2-201ENST00000427566 1453 ntBASIC13.29□□□□□ -0.28
XRCC2O43543 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
XRCC2O43543 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
XRCC2O43543 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
XRCC2O43543 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
XRCC2O43543 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
XRCC2O43543 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
XRCC2O43543 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
XRCC2O43543 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
XRCC2O43543 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
XRCC2O43543 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
XRCC2O43543 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
XRCC2O43543 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
XRCC2O43543 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
XRCC2O43543 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
XRCC2O43543 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
XRCC2O43543 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
XRCC2O43543 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
XRCC2O43543 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
XRCC2O43543 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.29□□□□□ -0.28
XRCC2O43543 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.29□□□□□ -0.28
XRCC2O43543 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.29□□□□□ -0.28
XRCC2O43543 FAM86LP-201ENST00000478302 853 ntBASIC13.29□□□□□ -0.28
XRCC2O43543 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
XRCC2O43543 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.29□□□□□ -0.28
XRCC2O43543 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
XRCC2O43543 AC005498.2-205ENST00000593218 784 ntBASIC13.29□□□□□ -0.28
XRCC2O43543 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
XRCC2O43543 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
XRCC2O43543 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
XRCC2O43543 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms