Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.35■□□□□ 0.37
ATP2A1O14983 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP2A1O14983 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
ATP2A1O14983 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.35■□□□□ 0.37
ATP2A1O14983 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
ATP2A1O14983 FNTAP2-201ENST00000430308 634 ntBASIC17.35■□□□□ 0.37
ATP2A1O14983 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.35■□□□□ 0.37
ATP2A1O14983 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.35■□□□□ 0.37
ATP2A1O14983 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.35■□□□□ 0.37
ATP2A1O14983 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC17.35■□□□□ 0.37
ATP2A1O14983 AC068587.10-201ENST00000641210 219 ntBASIC17.35■□□□□ 0.37
ATP2A1O14983 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP2A1O14983 CICP11-201ENST00000434745 2827 ntBASIC17.35■□□□□ 0.37
ATP2A1O14983 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP2A1O14983 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP2A1O14983 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.35■□□□□ 0.37
ATP2A1O14983 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATP2A1O14983 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATP2A1O14983 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
ATP2A1O14983 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
ATP2A1O14983 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
ATP2A1O14983 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
ATP2A1O14983 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP2A1O14983 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATP2A1O14983 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP2A1O14983 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ATP2A1O14983 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
ATP2A1O14983 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP2A1O14983 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP2A1O14983 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP2A1O14983 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP2A1O14983 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP2A1O14983 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP2A1O14983 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATP2A1O14983 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
ATP2A1O14983 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
ATP2A1O14983 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP2A1O14983 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.34■□□□□ 0.37
ATP2A1O14983 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP2A1O14983 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC17.34■□□□□ 0.37
ATP2A1O14983 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
ATP2A1O14983 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.34■□□□□ 0.37
ATP2A1O14983 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.34■□□□□ 0.37
ATP2A1O14983 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC17.34■□□□□ 0.37
ATP2A1O14983 SERPINA13P-202ENST00000478994 924 ntBASIC17.34■□□□□ 0.37
ATP2A1O14983 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.34■□□□□ 0.37
ATP2A1O14983 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
ATP2A1O14983 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ATP2A1O14983 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC17.34■□□□□ 0.37
ATP2A1O14983 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
ATP2A1O14983 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.34■□□□□ 0.37
ATP2A1O14983 AL451050.2-201ENST00000606967 682 ntBASIC17.34■□□□□ 0.37
ATP2A1O14983 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.34■□□□□ 0.37
ATP2A1O14983 TSPY26P-202ENST00000565928 3884 ntBASIC17.34■□□□□ 0.37
ATP2A1O14983 AC008894.3-201ENST00000624324 3103 ntBASIC17.34■□□□□ 0.37
ATP2A1O14983 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
ATP2A1O14983 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.34■□□□□ 0.37
ATP2A1O14983 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
ATP2A1O14983 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.34■□□□□ 0.37
ATP2A1O14983 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATP2A1O14983 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.33■□□□□ 0.37
ATP2A1O14983 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATP2A1O14983 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATP2A1O14983 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATP2A1O14983 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ATP2A1O14983 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
ATP2A1O14983 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATP2A1O14983 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATP2A1O14983 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATP2A1O14983 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ATP2A1O14983 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.33■□□□□ 0.37
ATP2A1O14983 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP2A1O14983 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.33■□□□□ 0.36
ATP2A1O14983 FKBP4P6-201ENST00000457486 1332 ntBASIC17.33■□□□□ 0.36
ATP2A1O14983 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP2A1O14983 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ATP2A1O14983 RN7SKP175-201ENST00000408472 289 ntBASIC17.33■□□□□ 0.36
ATP2A1O14983 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.33■□□□□ 0.36
ATP2A1O14983 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC17.33■□□□□ 0.36
ATP2A1O14983 ACTG1P17-201ENST00000558391 1119 ntBASIC17.33■□□□□ 0.36
ATP2A1O14983 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC17.33■□□□□ 0.36
ATP2A1O14983 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
ATP2A1O14983 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.33■□□□□ 0.36
ATP2A1O14983 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.33■□□□□ 0.36
ATP2A1O14983 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP2A1O14983 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP2A1O14983 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.33■□□□□ 0.36
ATP2A1O14983 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.33■□□□□ 0.36
ATP2A1O14983 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.33■□□□□ 0.36
ATP2A1O14983 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
ATP2A1O14983 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP2A1O14983 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP2A1O14983 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP2A1O14983 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.33■□□□□ 0.36
ATP2A1O14983 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.33■□□□□ 0.36
ATP2A1O14983 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
ATP2A1O14983 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ATP2A1O14983 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
ATP2A1O14983 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ATP2A1O14983 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms