Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 RN7SL713P-201ENST00000582127 302 ntBASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 PPY2P-201ENST00000582808 702 ntBASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 NAT9-222ENST00000583476 583 ntTSL 3 BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 AC005695.3-201ENST00000614522 232 ntBASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 AL096828.3-201ENST00000615354 462 ntBASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 SNX12-206ENST00000622259 661 ntTSL 5 BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 AL008638.5-201ENST00000623814 1298 ntBASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 AL023775.1-201ENST00000454907 1746 ntBASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 KRT8P4-201ENST00000509735 1454 ntBASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
TBC1D3FA6NER0 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TBC1D3FA6NER0 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TBC1D3FA6NER0 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TBC1D3FA6NER0 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TBC1D3FA6NER0 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TBC1D3FA6NER0 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TBC1D3FA6NER0 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TBC1D3FA6NER0 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TBC1D3FA6NER0 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TBC1D3FA6NER0 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TBC1D3FA6NER0 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TBC1D3FA6NER0 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TBC1D3FA6NER0 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
TBC1D3FA6NER0 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TBC1D3FA6NER0 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
TBC1D3FA6NER0 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TBC1D3FA6NER0 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.13■□□□□ 0.01
TBC1D3FA6NER0 HLA-K-203ENST00000430151 1046 ntBASIC15.13■□□□□ 0.01
TBC1D3FA6NER0 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.13■□□□□ 0.01
TBC1D3FA6NER0 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.13■□□□□ 0.01
TBC1D3FA6NER0 AL391280.1-201ENST00000506969 1062 ntBASIC15.13■□□□□ 0.01
TBC1D3FA6NER0 ZNF767P-206ENST00000513792 565 ntBASIC15.13■□□□□ 0.01
TBC1D3FA6NER0 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC15.13■□□□□ 0.01
TBC1D3FA6NER0 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.13■□□□□ 0.01
TBC1D3FA6NER0 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC15.13■□□□□ 0.01
TBC1D3FA6NER0 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TBC1D3FA6NER0 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
TBC1D3FA6NER0 AC244157.2-201ENST00000616239 1006 ntBASIC15.13■□□□□ 0.01
TBC1D3FA6NER0 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
TBC1D3FA6NER0 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.13■□□□□ 0.01
TBC1D3FA6NER0 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.13■□□□□ 0.01
TBC1D3FA6NER0 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
TBC1D3FA6NER0 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.13■□□□□ 0.01
TBC1D3FA6NER0 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
TBC1D3FA6NER0 AL360270.3-201ENST00000609118 1348 ntBASIC15.13■□□□□ 0.01
TBC1D3FA6NER0 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.13■□□□□ 0.01
TBC1D3FA6NER0 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
TBC1D3FA6NER0 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3FA6NER0 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.12■□□□□ 0.01
TBC1D3FA6NER0 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3FA6NER0 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3FA6NER0 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3FA6NER0 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TBC1D3FA6NER0 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
TBC1D3FA6NER0 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3FA6NER0 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.12■□□□□ 0.01
TBC1D3FA6NER0 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3FA6NER0 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TBC1D3FA6NER0 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.12■□□□□ 0.01
TBC1D3FA6NER0 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3FA6NER0 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
TBC1D3FA6NER0 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3FA6NER0 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3FA6NER0 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.12■□□□□ 0.01
TBC1D3FA6NER0 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
TBC1D3FA6NER0 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.12■□□□□ 0.01
TBC1D3FA6NER0 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.12■□□□□ 0.01
TBC1D3FA6NER0 AC079178.1-201ENST00000420915 656 ntBASIC15.12■□□□□ 0.01
TBC1D3FA6NER0 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.12■□□□□ 0.01
TBC1D3FA6NER0 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.12■□□□□ 0.01
TBC1D3FA6NER0 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.12■□□□□ 0.01
TBC1D3FA6NER0 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15.12■□□□□ 0.01
TBC1D3FA6NER0 FTLP10-202ENST00000505798 471 ntBASIC15.12■□□□□ 0.01
TBC1D3FA6NER0 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3FA6NER0 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.12■□□□□ 0.01
TBC1D3FA6NER0 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.12■□□□□ 0.01
TBC1D3FA6NER0 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TBC1D3FA6NER0 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TBC1D3FA6NER0 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms