Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC144AA2RUR9 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC144AA2RUR9 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC144AA2RUR9 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC144AA2RUR9 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC144AA2RUR9 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC144AA2RUR9 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC144AA2RUR9 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCDC144AA2RUR9 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC144AA2RUR9 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC21.58■■□□□ 1.04
CCDC144AA2RUR9 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC21.58■■□□□ 1.04
CCDC144AA2RUR9 AL008718.2-201ENST00000609206 1313 ntBASIC21.58■■□□□ 1.04
CCDC144AA2RUR9 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.04
CCDC144AA2RUR9 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCDC144AA2RUR9 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC21.58■■□□□ 1.04
CCDC144AA2RUR9 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
CCDC144AA2RUR9 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC144AA2RUR9 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC144AA2RUR9 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC144AA2RUR9 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CCDC144AA2RUR9 AL662890.1-201ENST00000396818 632 ntBASIC21.57■■□□□ 1.04
CCDC144AA2RUR9 AC011742.3-201ENST00000439053 820 ntBASIC21.57■■□□□ 1.04
CCDC144AA2RUR9 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC21.57■■□□□ 1.04
CCDC144AA2RUR9 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC21.57■■□□□ 1.04
CCDC144AA2RUR9 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
CCDC144AA2RUR9 AP000346.4-201ENST00000614827 381 ntBASIC21.57■■□□□ 1.04
CCDC144AA2RUR9 AC091544.8-201ENST00000619490 361 ntBASIC21.57■■□□□ 1.04
CCDC144AA2RUR9 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC144AA2RUR9 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC144AA2RUR9 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC144AA2RUR9 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC21.57■■□□□ 1.04
CCDC144AA2RUR9 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC144AA2RUR9 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC21.57■■□□□ 1.04
CCDC144AA2RUR9 TUBBP5-203ENST00000508529 1334 ntBASIC21.57■■□□□ 1.04
CCDC144AA2RUR9 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC144AA2RUR9 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC144AA2RUR9 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC21.57■■□□□ 1.04
CCDC144AA2RUR9 AGK-211ENST00000629555 2765 ntTSL 5 BASIC21.57■■□□□ 1.04
CCDC144AA2RUR9 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC144AA2RUR9 ZBED1P1-201ENST00000502364 1930 ntBASIC21.57■■□□□ 1.04
CCDC144AA2RUR9 AMT-239ENST00000636865 1914 ntTSL 5 BASIC21.57■■□□□ 1.04
CCDC144AA2RUR9 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CCDC144AA2RUR9 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC21.56■■□□□ 1.04
CCDC144AA2RUR9 AL109954.1-202ENST00000564051 2148 ntBASIC21.56■■□□□ 1.04
CCDC144AA2RUR9 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC144AA2RUR9 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
CCDC144AA2RUR9 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC21.56■■□□□ 1.04
CCDC144AA2RUR9 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC21.56■■□□□ 1.04
CCDC144AA2RUR9 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC21.56■■□□□ 1.04
CCDC144AA2RUR9 RN7SL11P-201ENST00000471305 293 ntBASIC21.56■■□□□ 1.04
CCDC144AA2RUR9 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC21.56■■□□□ 1.04
CCDC144AA2RUR9 AL160314.3-201ENST00000556041 767 ntBASIC21.56■■□□□ 1.04
CCDC144AA2RUR9 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC21.56■■□□□ 1.04
CCDC144AA2RUR9 BX088702.1-201ENST00000610784 235 ntBASIC21.56■■□□□ 1.04
CCDC144AA2RUR9 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC21.56■■□□□ 1.04
CCDC144AA2RUR9 AC015967.2-201ENST00000624092 234 ntBASIC21.56■■□□□ 1.04
CCDC144AA2RUR9 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC144AA2RUR9 AC006435.4-201ENST00000625037 234 ntBASIC21.56■■□□□ 1.04
CCDC144AA2RUR9 AL356737.1-201ENST00000634391 234 ntBASIC21.56■■□□□ 1.04
CCDC144AA2RUR9 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC144AA2RUR9 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC144AA2RUR9 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CCDC144AA2RUR9 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CCDC144AA2RUR9 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC21.56■■□□□ 1.04
CCDC144AA2RUR9 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC144AA2RUR9 AC007292.2-201ENST00000593524 1812 ntBASIC21.56■■□□□ 1.04
CCDC144AA2RUR9 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC144AA2RUR9 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC144AA2RUR9 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC144AA2RUR9 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC21.56■■□□□ 1.04
CCDC144AA2RUR9 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC144AA2RUR9 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC144AA2RUR9 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC144AA2RUR9 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC144AA2RUR9 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC144AA2RUR9 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC21.56■■□□□ 1.04
CCDC144AA2RUR9 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CCDC144AA2RUR9 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
CCDC144AA2RUR9 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC144AA2RUR9 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC144AA2RUR9 MIR769-201ENST00000390225 118 ntBASIC21.55■■□□□ 1.04
CCDC144AA2RUR9 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC144AA2RUR9 SLC16A6P1-201ENST00000413214 1059 ntBASIC21.55■■□□□ 1.04
CCDC144AA2RUR9 PUDPP3-201ENST00000445368 636 ntBASIC21.55■■□□□ 1.04
CCDC144AA2RUR9 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CCDC144AA2RUR9 RPL18P13-201ENST00000478088 569 ntBASIC21.55■■□□□ 1.04
CCDC144AA2RUR9 RN7SL163P-201ENST00000583100 276 ntBASIC21.55■■□□□ 1.04
CCDC144AA2RUR9 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
CCDC144AA2RUR9 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CCDC144AA2RUR9 RPL35-206ENST00000629845 340 ntTSL 5 BASIC21.55■■□□□ 1.04
CCDC144AA2RUR9 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC21.55■■□□□ 1.04
CCDC144AA2RUR9 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC144AA2RUR9 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CCDC144AA2RUR9 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC144AA2RUR9 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC21.55■■□□□ 1.04
CCDC144AA2RUR9 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CCDC144AA2RUR9 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
CCDC144AA2RUR9 ACE3P-201ENST00000423435 1973 ntBASIC21.55■■□□□ 1.04
CCDC144AA2RUR9 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC21.55■■□□□ 1.04
CCDC144AA2RUR9 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms