Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX49Q9Y6V7 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX49Q9Y6V7 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX49Q9Y6V7 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX49Q9Y6V7 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
DDX49Q9Y6V7 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 AC127383.1-201ENST00000444697 1800 ntBASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 DOC2GP-202ENST00000514950 1163 ntBASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 IGHV3-72-202ENST00000621503 303 ntBASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 AC004461.2-201ENST00000629517 803 ntBASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 AL033527.5-202ENST00000641632 1098 ntBASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 AC018892.3-201ENST00000623986 2499 ntBASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
DDX49Q9Y6V7 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX49Q9Y6V7 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX49Q9Y6V7 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC18.41■□□□□ 0.54
DDX49Q9Y6V7 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX49Q9Y6V7 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX49Q9Y6V7 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
DDX49Q9Y6V7 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
DDX49Q9Y6V7 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX49Q9Y6V7 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX49Q9Y6V7 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX49Q9Y6V7 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC18.41■□□□□ 0.54
DDX49Q9Y6V7 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC18.41■□□□□ 0.54
DDX49Q9Y6V7 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.41■□□□□ 0.54
DDX49Q9Y6V7 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DDX49Q9Y6V7 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX49Q9Y6V7 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DDX49Q9Y6V7 U91328.1-201ENST00000437528 223 ntBASIC18.41■□□□□ 0.54
DDX49Q9Y6V7 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.41■□□□□ 0.54
DDX49Q9Y6V7 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
DDX49Q9Y6V7 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC18.41■□□□□ 0.54
DDX49Q9Y6V7 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.41■□□□□ 0.54
DDX49Q9Y6V7 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.41■□□□□ 0.54
DDX49Q9Y6V7 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
DDX49Q9Y6V7 AL008721.1-201ENST00000609964 604 ntBASIC18.41■□□□□ 0.54
DDX49Q9Y6V7 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX49Q9Y6V7 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX49Q9Y6V7 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC18.41■□□□□ 0.54
DDX49Q9Y6V7 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX49Q9Y6V7 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX49Q9Y6V7 KRT8P12-202ENST00000472924 1397 ntBASIC18.41■□□□□ 0.54
DDX49Q9Y6V7 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
DDX49Q9Y6V7 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC18.41■□□□□ 0.54
DDX49Q9Y6V7 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX49Q9Y6V7 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
DDX49Q9Y6V7 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 AC140479.7-201ENST00000636301 2332 ntBASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.4■□□□□ 0.54
DDX49Q9Y6V7 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms