Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 RN7SL736P-201ENST00000613111 269 ntBASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 TBC1D3J-201ENST00000620719 1426 ntBASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 CROCCP1-201ENST00000426910 5675 ntBASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 FAM90A7P-201ENST00000382628 1395 ntBASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 FAM90A23P-201ENST00000400136 1395 ntBASIC15.75■□□□□ 0.11
HCFC2Q9Y5Z7 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 AC092850.2-201ENST00000623821 2697 ntBASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 HYMAI-201ENST00000635591 3347 ntBASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 NPM1P43-201ENST00000558669 786 ntBASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HCFC2Q9Y5Z7 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 AC006058.4-201ENST00000624016 1670 ntBASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 AC099398.1-201ENST00000567919 2776 ntBASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 SCARNA21-201ENST00000517026 139 ntBASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 NEU3-205ENST00000531619 582 ntTSL 5 BASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 NAT9-211ENST00000580632 799 ntTSL 3 BASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.73■□□□□ 0.11
HCFC2Q9Y5Z7 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms