Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PCDHB7Q9Y5E2 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHB7Q9Y5E2 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB7Q9Y5E2 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB7Q9Y5E2 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB7Q9Y5E2 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB7Q9Y5E2 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PCDHB7Q9Y5E2 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB7Q9Y5E2 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC16.28■□□□□ 0.2
PCDHB7Q9Y5E2 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.28■□□□□ 0.2
PCDHB7Q9Y5E2 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PCDHB7Q9Y5E2 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC16.28■□□□□ 0.2
PCDHB7Q9Y5E2 AC104073.2-201ENST00000453737 312 ntBASIC16.28■□□□□ 0.2
PCDHB7Q9Y5E2 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB7Q9Y5E2 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHB7Q9Y5E2 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHB7Q9Y5E2 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.28■□□□□ 0.2
PCDHB7Q9Y5E2 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC16.28■□□□□ 0.2
PCDHB7Q9Y5E2 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.28■□□□□ 0.2
PCDHB7Q9Y5E2 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHB7Q9Y5E2 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB7Q9Y5E2 AL645939.5-201ENST00000606834 243 ntBASIC16.28■□□□□ 0.2
PCDHB7Q9Y5E2 AC026740.1-201ENST00000607068 791 ntBASIC16.28■□□□□ 0.2
PCDHB7Q9Y5E2 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHB7Q9Y5E2 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC16.28■□□□□ 0.2
PCDHB7Q9Y5E2 AL136295.7-201ENST00000619226 1200 ntBASIC16.28■□□□□ 0.2
PCDHB7Q9Y5E2 AL162426.1-201ENST00000624141 743 ntBASIC16.28■□□□□ 0.2
PCDHB7Q9Y5E2 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHB7Q9Y5E2 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHB7Q9Y5E2 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB7Q9Y5E2 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB7Q9Y5E2 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.28■□□□□ 0.2
PCDHB7Q9Y5E2 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PCDHB7Q9Y5E2 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB7Q9Y5E2 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB7Q9Y5E2 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB7Q9Y5E2 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB7Q9Y5E2 AC012508.2-201ENST00000567613 1472 ntBASIC16.28■□□□□ 0.2
PCDHB7Q9Y5E2 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PCDHB7Q9Y5E2 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.28■□□□□ 0.2
PCDHB7Q9Y5E2 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB7Q9Y5E2 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB7Q9Y5E2 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB7Q9Y5E2 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDHB7Q9Y5E2 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDHB7Q9Y5E2 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB7Q9Y5E2 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDHB7Q9Y5E2 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB7Q9Y5E2 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB7Q9Y5E2 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
PCDHB7Q9Y5E2 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB7Q9Y5E2 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDHB7Q9Y5E2 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDHB7Q9Y5E2 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16.27■□□□□ 0.2
PCDHB7Q9Y5E2 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.27■□□□□ 0.2
PCDHB7Q9Y5E2 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC16.27■□□□□ 0.2
PCDHB7Q9Y5E2 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDHB7Q9Y5E2 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB7Q9Y5E2 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB7Q9Y5E2 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.27■□□□□ 0.2
PCDHB7Q9Y5E2 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
PCDHB7Q9Y5E2 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC16.27■□□□□ 0.2
PCDHB7Q9Y5E2 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
PCDHB7Q9Y5E2 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB7Q9Y5E2 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PCDHB7Q9Y5E2 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.27■□□□□ 0.19
PCDHB7Q9Y5E2 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHB7Q9Y5E2 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHB7Q9Y5E2 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHB7Q9Y5E2 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHB7Q9Y5E2 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHB7Q9Y5E2 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.27■□□□□ 0.19
PCDHB7Q9Y5E2 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHB7Q9Y5E2 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.27■□□□□ 0.19
PCDHB7Q9Y5E2 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.27■□□□□ 0.19
PCDHB7Q9Y5E2 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHB7Q9Y5E2 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHB7Q9Y5E2 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHB7Q9Y5E2 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHB7Q9Y5E2 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
PCDHB7Q9Y5E2 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PCDHB7Q9Y5E2 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.27■□□□□ 0.19
PCDHB7Q9Y5E2 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB7Q9Y5E2 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHB7Q9Y5E2 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB7Q9Y5E2 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
PCDHB7Q9Y5E2 PCDHB19P-201ENST00000570871 2371 ntBASIC16.26■□□□□ 0.19
PCDHB7Q9Y5E2 SHC1P1-201ENST00000425230 1745 ntBASIC16.26■□□□□ 0.19
PCDHB7Q9Y5E2 REXO1L4P-201ENST00000605109 1937 ntBASIC16.26■□□□□ 0.19
PCDHB7Q9Y5E2 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PCDHB7Q9Y5E2 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHB7Q9Y5E2 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PCDHB7Q9Y5E2 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.26■□□□□ 0.19
PCDHB7Q9Y5E2 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.26■□□□□ 0.19
PCDHB7Q9Y5E2 HLA-DQB2-229ENST00000411527 1059 ntBASIC16.26■□□□□ 0.19
PCDHB7Q9Y5E2 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.26■□□□□ 0.19
PCDHB7Q9Y5E2 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms