Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC00588Q9Y4M8 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC00588Q9Y4M8 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC00588Q9Y4M8 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC00588Q9Y4M8 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC10.43□□□□□ -0.74
LINC00588Q9Y4M8 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC00588Q9Y4M8 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC00588Q9Y4M8 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LINC00588Q9Y4M8 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC10.43□□□□□ -0.74
LINC00588Q9Y4M8 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LINC00588Q9Y4M8 C18orf15-201ENST00000623680 2534 ntBASIC10.43□□□□□ -0.74
LINC00588Q9Y4M8 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LINC00588Q9Y4M8 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC10.43□□□□□ -0.74
LINC00588Q9Y4M8 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC10.43□□□□□ -0.74
LINC00588Q9Y4M8 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LINC00588Q9Y4M8 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC00588Q9Y4M8 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC10.43□□□□□ -0.74
LINC00588Q9Y4M8 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC10.43□□□□□ -0.74
LINC00588Q9Y4M8 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
LINC00588Q9Y4M8 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC00588Q9Y4M8 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC10.43□□□□□ -0.74
LINC00588Q9Y4M8 AL359258.3-201ENST00000622910 2331 ntBASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 SSR4P1-203ENST00000599569 2260 ntBASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 TMBIM7P-203ENST00000641617 1718 ntBASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 FAM8A4P-201ENST00000435433 1213 ntBASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 MIR4741-201ENST00000579822 90 ntBASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 MIR4538-201ENST00000581377 78 ntBASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
LINC00588Q9Y4M8 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00588Q9Y4M8 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
LINC00588Q9Y4M8 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC10.41□□□□□ -0.74
LINC00588Q9Y4M8 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC10.41□□□□□ -0.74
LINC00588Q9Y4M8 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC10.41□□□□□ -0.74
LINC00588Q9Y4M8 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC10.41□□□□□ -0.74
LINC00588Q9Y4M8 GSN-206ENST00000394353 2311 ntTSL 2 BASIC10.41□□□□□ -0.74
LINC00588Q9Y4M8 AL122018.1-201ENST00000446607 2310 ntBASIC10.41□□□□□ -0.74
LINC00588Q9Y4M8 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
LINC00588Q9Y4M8 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms