Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 FAM210CP-201ENST00000445714 574 ntBASIC12.84□□□□□ -0.35
KCNIP3Q9Y2W7 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC12.84□□□□□ -0.35
KCNIP3Q9Y2W7 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC12.84□□□□□ -0.35
KCNIP3Q9Y2W7 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC12.84□□□□□ -0.35
KCNIP3Q9Y2W7 COQ9-214ENST00000567933 882 ntTSL 3 BASIC12.84□□□□□ -0.35
KCNIP3Q9Y2W7 AL138918.1-201ENST00000568306 659 ntBASIC12.84□□□□□ -0.35
KCNIP3Q9Y2W7 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC12.84□□□□□ -0.35
KCNIP3Q9Y2W7 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
KCNIP3Q9Y2W7 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
KCNIP3Q9Y2W7 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
KCNIP3Q9Y2W7 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC12.84□□□□□ -0.35
KCNIP3Q9Y2W7 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
KCNIP3Q9Y2W7 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KCNIP3Q9Y2W7 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
KCNIP3Q9Y2W7 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KCNIP3Q9Y2W7 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.84□□□□□ -0.35
KCNIP3Q9Y2W7 AL607033.1-201ENST00000623900 1599 ntBASIC12.84□□□□□ -0.35
KCNIP3Q9Y2W7 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
KCNIP3Q9Y2W7 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KCNIP3Q9Y2W7 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KCNIP3Q9Y2W7 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
KCNIP3Q9Y2W7 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
KCNIP3Q9Y2W7 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KCNIP3Q9Y2W7 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KCNIP3Q9Y2W7 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KCNIP3Q9Y2W7 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
KCNIP3Q9Y2W7 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
KCNIP3Q9Y2W7 BCAR1-209ENST00000546196 1340 ntBASIC12.84□□□□□ -0.35
KCNIP3Q9Y2W7 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
KCNIP3Q9Y2W7 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC12.84□□□□□ -0.35
KCNIP3Q9Y2W7 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC12.84□□□□□ -0.35
KCNIP3Q9Y2W7 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
KCNIP3Q9Y2W7 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC12.84□□□□□ -0.35
KCNIP3Q9Y2W7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
KCNIP3Q9Y2W7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
KCNIP3Q9Y2W7 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC12.84□□□□□ -0.35
KCNIP3Q9Y2W7 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.84□□□□□ -0.35
KCNIP3Q9Y2W7 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
KCNIP3Q9Y2W7 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.35
KCNIP3Q9Y2W7 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
KCNIP3Q9Y2W7 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.83□□□□□ -0.35
KCNIP3Q9Y2W7 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 FAM215A-202ENST00000632077 792 ntBASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 BSG-215ENST00000618006 1329 ntTSL 2 BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
KCNIP3Q9Y2W7 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
KCNIP3Q9Y2W7 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms