Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 AC092850.2-201ENST00000623821 2697 ntBASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 NCR3-202ENST00000376071 541 ntTSL 5 BASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 AL627422.1-201ENST00000434104 580 ntBASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 AP000358.1-201ENST00000456260 156 ntBASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 AC024293.1-201ENST00000467930 498 ntBASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 NUDT4P2-201ENST00000578341 546 ntBASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 AC004466.1-201ENST00000599515 1080 ntBASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 AC009884.2-201ENST00000603110 324 ntBASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 LINC01783-202ENST00000614408 828 ntBASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 BX284668.2-205ENST00000619677 828 ntBASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
ZC3H4Q9UPT8 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 MBLAC2-202ENST00000514906 1936 ntBASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 AC090502.4-201ENST00000551714 1386 ntBASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 MIR557-201ENST00000385239 98 ntBASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 AC092638.2-201ENST00000441105 947 ntBASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 AGPAT5P1-201ENST00000455855 1019 ntBASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 RN7SL81P-201ENST00000493781 261 ntBASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 AL118516.1-201ENST00000564152 670 ntBASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 DGAT2L7P-201ENST00000602462 744 ntBASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 AL157813.1-201ENST00000612996 587 ntBASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 AC018695.6-201ENST00000614011 534 ntBASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC18.22■□□□□ 0.51
ZC3H4Q9UPT8 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZC3H4Q9UPT8 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ZC3H4Q9UPT8 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZC3H4Q9UPT8 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZC3H4Q9UPT8 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.21■□□□□ 0.51
ZC3H4Q9UPT8 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.21■□□□□ 0.51
ZC3H4Q9UPT8 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZC3H4Q9UPT8 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ZC3H4Q9UPT8 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC18.21■□□□□ 0.51
ZC3H4Q9UPT8 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ZC3H4Q9UPT8 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ZC3H4Q9UPT8 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms