Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.37■□□□□ 0.53
DENND2AQ9ULE3 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC18.37■□□□□ 0.53
DENND2AQ9ULE3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 AC079178.1-201ENST00000420915 656 ntBASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 RGS5-214ENST00000429865 754 ntTSL 3 BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 CD74-212ENST00000524315 584 ntTSL 5 BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 AC244093.1-201ENST00000610837 814 ntBASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 AC005695.3-201ENST00000614522 232 ntBASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
DENND2AQ9ULE3 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DENND2AQ9ULE3 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC18.35■□□□□ 0.53
DENND2AQ9ULE3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
DENND2AQ9ULE3 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DENND2AQ9ULE3 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
DENND2AQ9ULE3 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DENND2AQ9ULE3 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
DENND2AQ9ULE3 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DENND2AQ9ULE3 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DENND2AQ9ULE3 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DENND2AQ9ULE3 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
DENND2AQ9ULE3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
DENND2AQ9ULE3 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DENND2AQ9ULE3 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC18.35■□□□□ 0.53
DENND2AQ9ULE3 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
DENND2AQ9ULE3 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DENND2AQ9ULE3 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DENND2AQ9ULE3 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
DENND2AQ9ULE3 MIR1247-201ENST00000408206 136 ntBASIC18.35■□□□□ 0.53
DENND2AQ9ULE3 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC18.35■□□□□ 0.53
DENND2AQ9ULE3 AC104306.2-201ENST00000451877 341 ntBASIC18.35■□□□□ 0.53
DENND2AQ9ULE3 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DENND2AQ9ULE3 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
DENND2AQ9ULE3 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
DENND2AQ9ULE3 AC244157.2-201ENST00000616239 1006 ntBASIC18.35■□□□□ 0.53
DENND2AQ9ULE3 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
DENND2AQ9ULE3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
DENND2AQ9ULE3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC18.35■□□□□ 0.53
DENND2AQ9ULE3 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DENND2AQ9ULE3 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DENND2AQ9ULE3 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DENND2AQ9ULE3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
DENND2AQ9ULE3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
DENND2AQ9ULE3 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.35■□□□□ 0.53
DENND2AQ9ULE3 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
DENND2AQ9ULE3 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DENND2AQ9ULE3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
DENND2AQ9ULE3 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
DENND2AQ9ULE3 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC18.34■□□□□ 0.53
DENND2AQ9ULE3 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
DENND2AQ9ULE3 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
DENND2AQ9ULE3 AC126365.1-201ENST00000578585 1514 ntBASIC18.34■□□□□ 0.53
DENND2AQ9ULE3 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DENND2AQ9ULE3 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DENND2AQ9ULE3 AC138035.3-201ENST00000622706 2791 ntBASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms