Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
THUMPD1Q9NXG2 LINC01230-201ENST00000625222 3017 ntBASIC14.41□□□□□ -0.1
THUMPD1Q9NXG2 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
THUMPD1Q9NXG2 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.41□□□□□ -0.1
THUMPD1Q9NXG2 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
THUMPD1Q9NXG2 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
THUMPD1Q9NXG2 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.41□□□□□ -0.1
THUMPD1Q9NXG2 TUBB3P1-201ENST00000405796 1332 ntBASIC14.41□□□□□ -0.1
THUMPD1Q9NXG2 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
THUMPD1Q9NXG2 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
THUMPD1Q9NXG2 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 AP000347.1-202ENST00000435868 847 ntBASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 AC067863.1-201ENST00000494933 530 ntBASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 AC069120.2-201ENST00000524091 540 ntBASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 AC092865.5-201ENST00000545435 363 ntBASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 AL512361.1-201ENST00000554200 418 ntBASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 AC010336.2-201ENST00000564226 506 ntBASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 AL138828.2-201ENST00000615812 383 ntBASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 SPDYE12P-201ENST00000618416 771 ntBASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 AF228730.6-201ENST00000641497 218 ntBASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 AC084121.3-201ENST00000641716 218 ntBASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 AC041040.2-201ENST00000622926 2899 ntBASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 AC087499.5-201ENST00000452760 1342 ntBASIC14.4□□□□□ -0.1
THUMPD1Q9NXG2 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.11
THUMPD1Q9NXG2 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
THUMPD1Q9NXG2 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
THUMPD1Q9NXG2 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.39□□□□□ -0.11
THUMPD1Q9NXG2 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.39□□□□□ -0.11
THUMPD1Q9NXG2 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
THUMPD1Q9NXG2 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
THUMPD1Q9NXG2 MTHFR-210ENST00000641407 2387 ntBASIC14.39□□□□□ -0.11
THUMPD1Q9NXG2 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
THUMPD1Q9NXG2 REXO1L4P-201ENST00000605109 1937 ntBASIC14.39□□□□□ -0.11
THUMPD1Q9NXG2 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
THUMPD1Q9NXG2 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
THUMPD1Q9NXG2 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
THUMPD1Q9NXG2 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
THUMPD1Q9NXG2 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
THUMPD1Q9NXG2 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
THUMPD1Q9NXG2 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
THUMPD1Q9NXG2 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.39□□□□□ -0.11
THUMPD1Q9NXG2 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.39□□□□□ -0.11
THUMPD1Q9NXG2 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
THUMPD1Q9NXG2 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
THUMPD1Q9NXG2 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
THUMPD1Q9NXG2 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
THUMPD1Q9NXG2 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
THUMPD1Q9NXG2 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.39□□□□□ -0.11
THUMPD1Q9NXG2 AC125807.1-201ENST00000483097 614 ntBASIC14.39□□□□□ -0.11
THUMPD1Q9NXG2 TIMM17BP1-201ENST00000545713 516 ntBASIC14.39□□□□□ -0.11
THUMPD1Q9NXG2 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.39□□□□□ -0.11
THUMPD1Q9NXG2 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.39□□□□□ -0.11
THUMPD1Q9NXG2 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.39□□□□□ -0.11
THUMPD1Q9NXG2 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.39□□□□□ -0.11
THUMPD1Q9NXG2 AC027612.4-201ENST00000605371 583 ntBASIC14.39□□□□□ -0.11
THUMPD1Q9NXG2 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms