Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBQLN4Q9NRR5 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBQLN4Q9NRR5 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBQLN4Q9NRR5 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBQLN4Q9NRR5 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBQLN4Q9NRR5 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBQLN4Q9NRR5 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UBQLN4Q9NRR5 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBQLN4Q9NRR5 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
UBQLN4Q9NRR5 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC14.04□□□□□ -0.16
UBQLN4Q9NRR5 AC114812.1-204ENST00000449669 728 ntBASIC14.04□□□□□ -0.16
UBQLN4Q9NRR5 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UBQLN4Q9NRR5 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UBQLN4Q9NRR5 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.04□□□□□ -0.16
UBQLN4Q9NRR5 WFDC1-204ENST00000613603 549 ntBASIC14.04□□□□□ -0.16
UBQLN4Q9NRR5 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UBQLN4Q9NRR5 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.04□□□□□ -0.16
UBQLN4Q9NRR5 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
UBQLN4Q9NRR5 LILRP1-201ENST00000444199 1370 ntBASIC14.04□□□□□ -0.16
UBQLN4Q9NRR5 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBQLN4Q9NRR5 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.04□□□□□ -0.16
UBQLN4Q9NRR5 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
UBQLN4Q9NRR5 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.04□□□□□ -0.16
UBQLN4Q9NRR5 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBQLN4Q9NRR5 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBQLN4Q9NRR5 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBQLN4Q9NRR5 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.04□□□□□ -0.16
UBQLN4Q9NRR5 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
UBQLN4Q9NRR5 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBQLN4Q9NRR5 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBQLN4Q9NRR5 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBQLN4Q9NRR5 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
UBQLN4Q9NRR5 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBQLN4Q9NRR5 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.04□□□□□ -0.16
UBQLN4Q9NRR5 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBQLN4Q9NRR5 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
UBQLN4Q9NRR5 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 ACKR1-201ENST00000368121 1240 ntBASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 AL139094.1-201ENST00000405549 1188 ntBASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 AP005019.2-201ENST00000615104 511 ntBASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 CU634019.7-201ENST00000624153 1185 ntBASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 FP236241.2-201ENST00000624906 1185 ntBASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 AL033527.5-201ENST00000641382 801 ntBASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 LINC01101-201ENST00000622953 1884 ntBASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 REXO1L5P-201ENST00000622260 2098 ntBASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 AJ011931.1-201ENST00000618749 2492 ntBASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
UBQLN4Q9NRR5 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
UBQLN4Q9NRR5 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBQLN4Q9NRR5 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBQLN4Q9NRR5 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBQLN4Q9NRR5 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBQLN4Q9NRR5 AC013726.1-201ENST00000563747 2285 ntBASIC14.02□□□□□ -0.16
UBQLN4Q9NRR5 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBQLN4Q9NRR5 AL157414.3-201ENST00000624276 1954 ntBASIC14.02□□□□□ -0.16
UBQLN4Q9NRR5 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBQLN4Q9NRR5 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBQLN4Q9NRR5 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBQLN4Q9NRR5 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
UBQLN4Q9NRR5 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
UBQLN4Q9NRR5 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms