Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 LINC01144-201ENST00000626198 1710 ntBASIC18.23■□□□□ 0.51
RTN4Q9NQC3 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RTN4Q9NQC3 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RTN4Q9NQC3 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC18.23■□□□□ 0.51
RTN4Q9NQC3 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC18.23■□□□□ 0.51
RTN4Q9NQC3 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTN4Q9NQC3 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTN4Q9NQC3 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
RTN4Q9NQC3 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTN4Q9NQC3 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
RTN4Q9NQC3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTN4Q9NQC3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTN4Q9NQC3 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTN4Q9NQC3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.23■□□□□ 0.51
RTN4Q9NQC3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.23■□□□□ 0.51
RTN4Q9NQC3 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.23■□□□□ 0.51
RTN4Q9NQC3 RNU6-775P-201ENST00000459318 96 ntBASIC18.23■□□□□ 0.51
RTN4Q9NQC3 POU5F1P6-201ENST00000466990 990 ntBASIC18.23■□□□□ 0.51
RTN4Q9NQC3 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RTN4Q9NQC3 AC136475.1-203ENST00000602756 1034 ntTSL 3 BASIC18.23■□□□□ 0.51
RTN4Q9NQC3 AC010654.1-201ENST00000615722 808 ntBASIC18.23■□□□□ 0.51
RTN4Q9NQC3 AL355877.3-201ENST00000622820 899 ntBASIC18.23■□□□□ 0.51
RTN4Q9NQC3 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTN4Q9NQC3 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC18.23■□□□□ 0.51
RTN4Q9NQC3 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTN4Q9NQC3 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTN4Q9NQC3 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC18.23■□□□□ 0.51
RTN4Q9NQC3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTN4Q9NQC3 MIR193BHG-211ENST00000641433 5365 ntBASIC18.23■□□□□ 0.51
RTN4Q9NQC3 PI4KAP1-204ENST00000612579 1703 ntBASIC18.23■□□□□ 0.51
RTN4Q9NQC3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RTN4Q9NQC3 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RTN4Q9NQC3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.23■□□□□ 0.51
RTN4Q9NQC3 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.23■□□□□ 0.51
RTN4Q9NQC3 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTN4Q9NQC3 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTN4Q9NQC3 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 OSBPL3-204ENST00000409069 2614 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 POM121L4P-202ENST00000427789 1891 ntBASIC18.22■□□□□ 0.51
RTN4Q9NQC3 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 DEFB103A-201ENST00000314357 518 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 DEFB103B-201ENST00000318124 518 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 AC006518.1-201ENST00000541449 943 ntBASIC18.22■□□□□ 0.51
RTN4Q9NQC3 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 MTDHP4-201ENST00000600287 670 ntBASIC18.22■□□□□ 0.51
RTN4Q9NQC3 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 AL359881.3-201ENST00000602640 1721 ntBASIC18.22■□□□□ 0.51
RTN4Q9NQC3 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 A1CF-203ENST00000373995 2211 ntTSL 2 BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RTN4Q9NQC3 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTN4Q9NQC3 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RTN4Q9NQC3 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTN4Q9NQC3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RTN4Q9NQC3 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.21■□□□□ 0.51
RTN4Q9NQC3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.21■□□□□ 0.51
RTN4Q9NQC3 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
RTN4Q9NQC3 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RTN4Q9NQC3 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC18.21■□□□□ 0.51
RTN4Q9NQC3 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.21■□□□□ 0.51
RTN4Q9NQC3 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTN4Q9NQC3 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTN4Q9NQC3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.21■□□□□ 0.51
RTN4Q9NQC3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.21■□□□□ 0.51
RTN4Q9NQC3 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.21■□□□□ 0.51
RTN4Q9NQC3 FGFR3P6-201ENST00000457012 610 ntBASIC18.21■□□□□ 0.51
RTN4Q9NQC3 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RTN4Q9NQC3 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC18.21■□□□□ 0.51
RTN4Q9NQC3 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RTN4Q9NQC3 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms