Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 PMS2P4-201ENST00000412466 1052 ntBASIC13.96□□□□□ -0.17
HMG20AQ9NP66 IGLL3P-201ENST00000412472 434 ntBASIC13.96□□□□□ -0.17
HMG20AQ9NP66 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 IGHV3-22-201ENST00000520721 359 ntBASIC13.96□□□□□ -0.17
HMG20AQ9NP66 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
HMG20AQ9NP66 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HMG20AQ9NP66 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.96□□□□□ -0.18
HMG20AQ9NP66 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HMG20AQ9NP66 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
HMG20AQ9NP66 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HMG20AQ9NP66 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.96□□□□□ -0.18
HMG20AQ9NP66 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
HMG20AQ9NP66 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
HMG20AQ9NP66 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.96□□□□□ -0.18
HMG20AQ9NP66 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
HMG20AQ9NP66 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
HMG20AQ9NP66 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
HMG20AQ9NP66 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
HMG20AQ9NP66 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
HMG20AQ9NP66 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.96□□□□□ -0.18
HMG20AQ9NP66 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.96□□□□□ -0.18
HMG20AQ9NP66 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
HMG20AQ9NP66 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMG20AQ9NP66 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.95□□□□□ -0.18
HMG20AQ9NP66 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMG20AQ9NP66 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMG20AQ9NP66 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC13.95□□□□□ -0.18
HMG20AQ9NP66 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMG20AQ9NP66 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMG20AQ9NP66 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.95□□□□□ -0.18
HMG20AQ9NP66 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMG20AQ9NP66 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMG20AQ9NP66 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.95□□□□□ -0.18
HMG20AQ9NP66 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.95□□□□□ -0.18
HMG20AQ9NP66 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMG20AQ9NP66 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMG20AQ9NP66 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMG20AQ9NP66 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
HMG20AQ9NP66 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMG20AQ9NP66 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.95□□□□□ -0.18
HMG20AQ9NP66 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMG20AQ9NP66 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
HMG20AQ9NP66 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HMG20AQ9NP66 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.95□□□□□ -0.18
HMG20AQ9NP66 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
HMG20AQ9NP66 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMG20AQ9NP66 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.95□□□□□ -0.18
HMG20AQ9NP66 TPM4P1-201ENST00000436100 807 ntBASIC13.95□□□□□ -0.18
HMG20AQ9NP66 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.95□□□□□ -0.18
HMG20AQ9NP66 HCG4B-203ENST00000450128 991 ntBASIC13.95□□□□□ -0.18
HMG20AQ9NP66 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
HMG20AQ9NP66 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.95□□□□□ -0.18
HMG20AQ9NP66 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.95□□□□□ -0.18
HMG20AQ9NP66 SLC25A6P4-201ENST00000586535 553 ntBASIC13.95□□□□□ -0.18
HMG20AQ9NP66 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.95□□□□□ -0.18
HMG20AQ9NP66 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMG20AQ9NP66 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMG20AQ9NP66 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.95□□□□□ -0.18
HMG20AQ9NP66 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HMG20AQ9NP66 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HMG20AQ9NP66 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
HMG20AQ9NP66 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC13.95□□□□□ -0.18
HMG20AQ9NP66 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
HMG20AQ9NP66 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
HMG20AQ9NP66 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms