Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 AC009477.1-201ENST00000452936 217 ntBASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
TUBA1CQ9BQE3 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 AC107918.4-201ENST00000641966 3141 ntBASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 SERBP1P5-201ENST00000510079 1181 ntBASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 AC009407.1-201ENST00000568958 598 ntBASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TUBA1CQ9BQE3 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.46□□□□□ -0.09
TUBA1CQ9BQE3 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms