Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 AC120114.3-201ENST00000611923 658 ntBASIC13.14□□□□□ -0.31
CMSS1Q9BQ75 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
CMSS1Q9BQ75 BX640515.1-201ENST00000617215 977 ntBASIC13.14□□□□□ -0.31
CMSS1Q9BQ75 AC055717.3-201ENST00000622967 595 ntBASIC13.14□□□□□ -0.31
CMSS1Q9BQ75 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.14□□□□□ -0.31
CMSS1Q9BQ75 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CMSS1Q9BQ75 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CMSS1Q9BQ75 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CMSS1Q9BQ75 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CMSS1Q9BQ75 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CMSS1Q9BQ75 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CMSS1Q9BQ75 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.14□□□□□ -0.31
CMSS1Q9BQ75 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.14□□□□□ -0.31
CMSS1Q9BQ75 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CMSS1Q9BQ75 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CMSS1Q9BQ75 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CMSS1Q9BQ75 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CMSS1Q9BQ75 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CMSS1Q9BQ75 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CMSS1Q9BQ75 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.14□□□□□ -0.31
CMSS1Q9BQ75 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CMSS1Q9BQ75 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CMSS1Q9BQ75 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.14□□□□□ -0.31
CMSS1Q9BQ75 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CMSS1Q9BQ75 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CMSS1Q9BQ75 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 FO393414.2-201ENST00000405153 598 ntBASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 AC069335.1-201ENST00000489972 472 ntBASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 KLK8-205ENST00000593490 267 ntTSL 3 BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 AC084121.4-201ENST00000641598 221 ntBASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 AF228730.8-201ENST00000642140 221 ntBASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CMSS1Q9BQ75 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 ACE3P-201ENST00000423435 1973 ntBASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMSS1Q9BQ75 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms