Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VGLL1Q99990 RPS19-201ENST00000221975 500 ntTSL 3 BASIC11.64□□□□□ -0.55
VGLL1Q99990 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VGLL1Q99990 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
VGLL1Q99990 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC11.64□□□□□ -0.55
VGLL1Q99990 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC11.64□□□□□ -0.55
VGLL1Q99990 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
VGLL1Q99990 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VGLL1Q99990 PMP22-202ENST00000395936 816 ntTSL 3 BASIC11.64□□□□□ -0.55
VGLL1Q99990 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
VGLL1Q99990 AC004832.2-201ENST00000426397 482 ntBASIC11.64□□□□□ -0.55
VGLL1Q99990 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC11.64□□□□□ -0.55
VGLL1Q99990 MTND6P24-201ENST00000440466 518 ntBASIC11.64□□□□□ -0.55
VGLL1Q99990 CEND1P1-201ENST00000451006 455 ntBASIC11.64□□□□□ -0.55
VGLL1Q99990 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC11.64□□□□□ -0.55
VGLL1Q99990 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC11.64□□□□□ -0.55
VGLL1Q99990 PTK7-212ENST00000476760 902 ntTSL 2 BASIC11.64□□□□□ -0.55
VGLL1Q99990 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC11.64□□□□□ -0.55
VGLL1Q99990 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC11.64□□□□□ -0.55
VGLL1Q99990 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC11.64□□□□□ -0.55
VGLL1Q99990 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC11.64□□□□□ -0.55
VGLL1Q99990 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
VGLL1Q99990 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC11.64□□□□□ -0.55
VGLL1Q99990 LITAF-210ENST00000571976 548 ntTSL 2 BASIC11.64□□□□□ -0.55
VGLL1Q99990 LITAF-214ENST00000574703 486 ntTSL 2 BASIC11.64□□□□□ -0.55
VGLL1Q99990 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC11.64□□□□□ -0.55
VGLL1Q99990 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC11.64□□□□□ -0.55
VGLL1Q99990 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC11.64□□□□□ -0.55
VGLL1Q99990 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
VGLL1Q99990 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VGLL1Q99990 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
VGLL1Q99990 AC011467.4-201ENST00000594891 528 ntBASIC11.64□□□□□ -0.55
VGLL1Q99990 MTDHP5-201ENST00000598980 586 ntBASIC11.64□□□□□ -0.55
VGLL1Q99990 AL133215.2-201ENST00000609242 977 ntBASIC11.64□□□□□ -0.55
VGLL1Q99990 AC105339.1-204ENST00000636249 355 ntBASIC11.64□□□□□ -0.55
VGLL1Q99990 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
VGLL1Q99990 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC11.64□□□□□ -0.55
VGLL1Q99990 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
VGLL1Q99990 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
VGLL1Q99990 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VGLL1Q99990 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VGLL1Q99990 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VGLL1Q99990 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
VGLL1Q99990 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
VGLL1Q99990 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
VGLL1Q99990 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
VGLL1Q99990 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC11.64□□□□□ -0.55
VGLL1Q99990 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
VGLL1Q99990 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
VGLL1Q99990 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
VGLL1Q99990 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
VGLL1Q99990 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC11.63□□□□□ -0.55
VGLL1Q99990 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
VGLL1Q99990 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
VGLL1Q99990 ABR-228ENST00000574437 3196 ntTSL 5 BASIC11.63□□□□□ -0.55
VGLL1Q99990 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
VGLL1Q99990 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
VGLL1Q99990 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
VGLL1Q99990 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
VGLL1Q99990 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
VGLL1Q99990 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC11.63□□□□□ -0.55
VGLL1Q99990 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
VGLL1Q99990 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC11.63□□□□□ -0.55
VGLL1Q99990 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
VGLL1Q99990 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
VGLL1Q99990 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
VGLL1Q99990 ELL2P1-201ENST00000413990 1906 ntBASIC11.63□□□□□ -0.55
VGLL1Q99990 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
VGLL1Q99990 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
VGLL1Q99990 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
VGLL1Q99990 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
VGLL1Q99990 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC11.63□□□□□ -0.55
VGLL1Q99990 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
VGLL1Q99990 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
VGLL1Q99990 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC11.63□□□□□ -0.55
VGLL1Q99990 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC11.63□□□□□ -0.55
VGLL1Q99990 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC11.63□□□□□ -0.55
VGLL1Q99990 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC11.63□□□□□ -0.55
VGLL1Q99990 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC11.63□□□□□ -0.55
VGLL1Q99990 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
VGLL1Q99990 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC11.63□□□□□ -0.55
VGLL1Q99990 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC11.63□□□□□ -0.55
VGLL1Q99990 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC11.63□□□□□ -0.55
VGLL1Q99990 POLD2P1-201ENST00000511220 997 ntBASIC11.63□□□□□ -0.55
VGLL1Q99990 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
VGLL1Q99990 PGAM5P1-201ENST00000518923 814 ntBASIC11.63□□□□□ -0.55
VGLL1Q99990 GATD1-206ENST00000526325 756 ntTSL 5 BASIC11.63□□□□□ -0.55
VGLL1Q99990 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC11.63□□□□□ -0.55
VGLL1Q99990 PUS1-205ENST00000535067 838 ntTSL 3 BASIC11.63□□□□□ -0.55
VGLL1Q99990 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
VGLL1Q99990 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC11.63□□□□□ -0.55
VGLL1Q99990 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC11.63□□□□□ -0.55
VGLL1Q99990 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC11.63□□□□□ -0.55
VGLL1Q99990 RN7SL828P-201ENST00000607615 303 ntBASIC11.63□□□□□ -0.55
VGLL1Q99990 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
VGLL1Q99990 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
VGLL1Q99990 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC11.63□□□□□ -0.55
VGLL1Q99990 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC11.63□□□□□ -0.55
VGLL1Q99990 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
VGLL1Q99990 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms