Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.05■□□□□ 0.16
CASD1Q96PB1 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CASD1Q96PB1 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CASD1Q96PB1 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CASD1Q96PB1 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
CASD1Q96PB1 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
CASD1Q96PB1 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.05■□□□□ 0.16
CASD1Q96PB1 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
CASD1Q96PB1 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.05■□□□□ 0.16
CASD1Q96PB1 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CASD1Q96PB1 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CASD1Q96PB1 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CASD1Q96PB1 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CASD1Q96PB1 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.05■□□□□ 0.16
CASD1Q96PB1 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CASD1Q96PB1 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CASD1Q96PB1 PARVG-202ENST00000415224 999 ntTSL 2 BASIC16.05■□□□□ 0.16
CASD1Q96PB1 AL596276.2-201ENST00000447525 331 ntBASIC16.05■□□□□ 0.16
CASD1Q96PB1 EEF1DP6-201ENST00000449232 372 ntBASIC16.05■□□□□ 0.16
CASD1Q96PB1 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.05■□□□□ 0.16
CASD1Q96PB1 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.05■□□□□ 0.16
CASD1Q96PB1 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC16.05■□□□□ 0.16
CASD1Q96PB1 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16.05■□□□□ 0.16
CASD1Q96PB1 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC16.05■□□□□ 0.16
CASD1Q96PB1 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.05■□□□□ 0.16
CASD1Q96PB1 AC103988.2-201ENST00000561804 725 ntBASIC16.05■□□□□ 0.16
CASD1Q96PB1 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.05■□□□□ 0.16
CASD1Q96PB1 AC008805.1-201ENST00000590892 364 ntBASIC16.05■□□□□ 0.16
CASD1Q96PB1 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC16.05■□□□□ 0.16
CASD1Q96PB1 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
CASD1Q96PB1 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.05■□□□□ 0.16
CASD1Q96PB1 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CASD1Q96PB1 Z98259.2-201ENST00000641583 609 ntBASIC16.05■□□□□ 0.16
CASD1Q96PB1 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CASD1Q96PB1 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
CASD1Q96PB1 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CASD1Q96PB1 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.05■□□□□ 0.16
CASD1Q96PB1 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.05■□□□□ 0.16
CASD1Q96PB1 DOC2GP-204ENST00000639052 2548 ntBASIC16.05■□□□□ 0.16
CASD1Q96PB1 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
CASD1Q96PB1 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CASD1Q96PB1 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CASD1Q96PB1 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.05■□□□□ 0.16
CASD1Q96PB1 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.05■□□□□ 0.16
CASD1Q96PB1 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.05■□□□□ 0.16
CASD1Q96PB1 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CASD1Q96PB1 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CASD1Q96PB1 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CASD1Q96PB1 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.05■□□□□ 0.16
CASD1Q96PB1 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CASD1Q96PB1 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CASD1Q96PB1 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CASD1Q96PB1 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.05■□□□□ 0.16
CASD1Q96PB1 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CASD1Q96PB1 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CASD1Q96PB1 AC023090.2-201ENST00000625182 2110 ntBASIC16.04■□□□□ 0.16
CASD1Q96PB1 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CASD1Q96PB1 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CASD1Q96PB1 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CASD1Q96PB1 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CASD1Q96PB1 AC112693.3-201ENST00000624819 1983 ntBASIC16.04■□□□□ 0.16
CASD1Q96PB1 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CASD1Q96PB1 FAM90A7P-201ENST00000382628 1395 ntBASIC16.04■□□□□ 0.16
CASD1Q96PB1 FAM90A23P-201ENST00000400136 1395 ntBASIC16.04■□□□□ 0.16
CASD1Q96PB1 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.04■□□□□ 0.16
CASD1Q96PB1 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CASD1Q96PB1 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CASD1Q96PB1 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CASD1Q96PB1 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CASD1Q96PB1 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CASD1Q96PB1 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CASD1Q96PB1 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CASD1Q96PB1 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.04■□□□□ 0.16
CASD1Q96PB1 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CASD1Q96PB1 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CASD1Q96PB1 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CASD1Q96PB1 MIR33B-201ENST00000385104 96 ntBASIC16.04■□□□□ 0.16
CASD1Q96PB1 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CASD1Q96PB1 TLE1P1-201ENST00000422965 589 ntBASIC16.04■□□□□ 0.16
CASD1Q96PB1 AC006335.1-201ENST00000445200 547 ntBASIC16.04■□□□□ 0.16
CASD1Q96PB1 MPRIPP1-201ENST00000452433 1089 ntBASIC16.04■□□□□ 0.16
CASD1Q96PB1 RCC2P8-201ENST00000502779 1035 ntBASIC16.04■□□□□ 0.16
CASD1Q96PB1 ALG3P1-201ENST00000508806 1114 ntBASIC16.04■□□□□ 0.16
CASD1Q96PB1 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.04■□□□□ 0.16
CASD1Q96PB1 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC16.04■□□□□ 0.16
CASD1Q96PB1 SCARNA21-201ENST00000517026 139 ntBASIC16.04■□□□□ 0.16
CASD1Q96PB1 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.04■□□□□ 0.16
CASD1Q96PB1 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CASD1Q96PB1 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CASD1Q96PB1 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CASD1Q96PB1 PRKXP1-201ENST00000561423 1122 ntBASIC16.04■□□□□ 0.16
CASD1Q96PB1 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.04■□□□□ 0.16
CASD1Q96PB1 AC020922.3-201ENST00000595064 547 ntBASIC16.04■□□□□ 0.16
CASD1Q96PB1 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CASD1Q96PB1 AL353770.1-201ENST00000614915 403 ntBASIC16.04■□□□□ 0.16
CASD1Q96PB1 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.04■□□□□ 0.16
CASD1Q96PB1 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.04■□□□□ 0.16
CASD1Q96PB1 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CASD1Q96PB1 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.04■□□□□ 0.16
CASD1Q96PB1 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms